Kitasatospora setae: KSE_48860
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Entry
KSE_48860 CDS
T01648
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ksk
Kitasatospora setae
Pathway
ksk03420
Nucleotide excision repair
ksk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ksk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KSE_48860
03430 Mismatch repair
KSE_48860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksk03400
]
KSE_48860
Enzymes [BR:
ksk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KSE_48860
DNA repair and recombination proteins [BR:
ksk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KSE_48860
MMR (mismatch excision repair)
Other MMR factors
KSE_48860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
BAJ30664
UniProt:
E4NGN4
LinkDB
All DBs
Position
5397479..5400700
Genome browser
AA seq
1073 aa
AA seq
DB search
MSSTEPLRHPEQLRDLLGIPFNDEQVAAIGAPMAPGVIVAGAGSGKTTVMAARVVWLVGS
GAVRPEQVLGLTFTNKAAGELAERVRAALLRAGVRAEDEDALGDPQISTYHAFAGTLLKE
HGLRLGIEPDVRLLADATRFQLAARVLRQARGPFPALTGTFSALVAELVALDSELAEHLV
EPARLREHDEELLDQLAGVKLTNDDLRAVPKAARGRQELLRLVEDYRARKQKLGLLDFGD
QIAASARLAQQRPEVGRLLREQYRVVLLDEYQDTSVAQRLMLAGLFGGESGAGHPVTAVG
DPCQAIYGWRGASVANLDDFPRHFPLADGGPAHRFALSENRRSGGRLLDLANRLATPLRA
MHEGVEALRPAPGAERDGSARVALLPTHAAEIDWLADSIAHLVRTGTAPGRIAVLCRAGG
SFPDIHAALVERKVPVEVVGLGGLLQLPEVADLVAVCEVLQDPTANAALVRLLIGPRWRT
GPRDLALLGRRAAELVRTARPGEQDALSAAVAETDPTEVVSLADALETFVDAEQPDDLPF
SPEARVRFARFAREIRELRRALAEPLMDVLHRVLTATGLEVELSASPLALAARRRETLHS
FLDIAASFADLDGDPGLAAFLGFLRAAQEYERGLDAGLPGGEDTVKVLTAHKSKGLEWDV
VAVPGLVKGAFPSKKGRDSWTSTRKVLPHALRGDAATLPADPAWDAKGLGRFKQEMTEHA
GVEELRLGYVAFTRPRTLLLASGHWWGPTQKTRRGPSDFLTALREHCERPGNGEIEHWAE
PPGKDEKNPALDVSVETPWPLPLDPDAQRARRRVAQVVRHRLAGAPAPEGEPMAVEDQRL
LASWDRDLTALLGELERSRRTTRDVELPASLSATQLMRLAADPDGFARDLARPMPRPPAP
AARRGTRFHAWVQSRYDQPLLLGPEALPGLDEEEIEDERDLERLKDAFLRGPYARRTPYA
VEAPFQLVLAGRVVRGRIDAVYRAAEGGAGGAGGAGGAGAGAPRYEVVDWKTGREDSGDP
LQLAVYRLAWAEQAGVAVEEVAASFCYVRSGRVETPSGLPGRKELSDLLIGNR
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgactgagccgctgcggcacccggagcagctccgcgacctgctcggcatcccg
ttcaacgacgagcaggtggcggcgatcggcgcgccgatggcccccggcgtgatcgtggcc
ggcgcgggctccggcaagaccaccgtgatggccgcccgggtggtctggctggtcggctcc
ggcgcggtccgccccgagcaggtgctcggcctgaccttcaccaacaaggcggccggcgaa
ctcgccgaacgcgtccgggccgccctgctgcgggccggcgtccgcgccgaggacgaggac
gccctcggcgacccgcagatctccacctaccacgccttcgccggcaccctgctcaaggag
cacggcctgcggctgggcatcgaacccgacgtccggctgctggccgacgccacccgcttc
cagctcgccgcccgcgtcctgcgccaggcccgcggcccgttcccggcgctcaccggcacc
ttctccgcgctggtcgccgaactcgtcgcgctggactccgaactcgccgagcacctggtc
gagccggcccggctgcgggagcacgacgaggaactactggaccagctggccggcgtcaaa
ctgaccaacgacgacctgcgggccgtcccgaaggccgcccgcggccggcaggaactgctc
cggctggtcgaggactaccgggcccgcaagcagaagctcggcctgctcgacttcggcgac
cagatcgccgcctccgcccggctcgcccagcagcgccccgaggtcggccggctgctgcgc
gagcagtaccgggtggtgctgctggacgagtaccaggacacctcggtcgcccaacgcctc
atgctggcgggcctgttcggcggcgagtcgggcgccgggcacccggtcaccgcggtcggc
gacccctgccaggcgatctacggctggcgcggcgcctcggtcgccaacctggacgacttc
ccccggcacttcccgctcgccgacggcggcccggcgcaccgcttcgcgctcagcgagaac
cgccgcagcggcggccggctgctcgacctcgccaaccggctggccaccccgctgcgcgcc
atgcacgagggcgtcgaggcgctgcggcccgcccccggcgccgagcgggacggctccgcc
cgggtcgcgctgctgcccacccacgccgccgagatcgactggctggccgactcgatcgcc
cacctggtgcgcaccggcaccgcgcccggccggatcgccgtgctctgtcgggccggcggc
tccttccccgacatccacgccgcgctggtcgaacggaaggtcccggtcgaggtggtcggc
ctcggcggactgctgcaactcccggaggtggccgacctggtggcggtctgcgaggtcctc
caggacccgaccgcgaacgccgccctggtccggctgctgatcggcccgcgctggcgcacc
ggcccgcgcgacctggcgctgctcggccgccgcgccgccgaactcgtccgcaccgcccgc
cccggcgagcaggacgcgctgagcgccgccgtcgccgagaccgaccccaccgaggtggtc
tcgctggccgacgcgctggagaccttcgtcgacgccgagcagcccgacgacctgccgttc
tcgccggaggcccgggtgcggttcgcccggttcgcccgggagatccgcgaactgcgccgg
gcgctcgccgaaccgctgatggacgtcctgcaccgggtgctcaccgccaccggcctggag
gtcgaactctccgcctccccgctggcgctggccgcccgccggcgcgagaccctgcactcc
ttcctggacatcgccgcctccttcgccgacctggacggcgaccccggcctggccgccttc
ctcggcttcctgcgcgccgcccaggagtacgagcgcggcctggacgcgggcctgcccggc
ggcgaggacaccgtcaaggtgctcaccgcgcacaagtccaagggcctggagtgggacgtg
gtcgccgtccccggcctggtcaagggggcgttcccgtccaagaagggccgcgacagctgg
acctccacccgcaaggtgctgccgcacgccctgcgcggcgacgccgccaccctgcccgcc
gacccggcctgggacgccaagggcctcggccggttcaagcaggagatgaccgagcacgcc
ggggtcgaggaactgcggctcggctacgtcgcgttcacccggccgcgcacgctgctgctg
gcctccgggcactggtgggggccgacccagaagacccggcgcgggccgtcggacttcctg
accgcgctgcgcgagcactgcgagcgaccgggcaacggcgagatcgagcactgggccgag
ccgcccggcaaggacgagaagaaccccgcgctggacgtctcggtggagaccccctggccg
ctgccgctcgacccggacgcgcagcgcgcccgccgccgggtcgcccaggtggtccggcac
cggctggccggcgcgcccgcgccggagggcgagccgatggccgtcgaggaccagcggctg
ctggcctcctgggaccgcgacctgaccgcgctgctcggcgagttggagcgctcccggcgc
accacccgggacgtcgagctgcccgcctcgctctccgccacccagctgatgcggctggcc
gccgacccggacggcttcgcccgcgacctggcccgcccgatgccccgcccgcccgcgccc
gccgcccgccgcggcacccgcttccacgcctgggtgcagtcccgctacgaccagccgctg
ctgctcggccccgaggcgctgcccggcctggacgaggaggagatcgaggacgagcgcgac
ctggagcgcctcaaggacgccttcctgcgcggcccgtacgcccgccgcaccccgtacgcg
gtcgaggcgccgttccaactggtgctggccggccgggtggtgcgcggccggatcgacgcg
gtctaccgggccgccgagggcggggcgggcggggcggggggtgcgggcggggccggcgcg
ggggcgccgcgctacgaggtggtcgactggaagaccggccgcgaggactccggcgacccg
ctccaactggccgtctaccggctggcctgggccgagcaggcgggcgtcgcggtggaggag
gtggccgcctcgttctgctacgtgcgctccgggcgggtcgaaaccccgtcaggacttcct
ggccgaaaagagttgagcgatcttctgatcgggaataggtag
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