KEGG   Kitasatospora setae: KSE_48860
Entry
KSE_48860         CDS       T01648                                 
Name
(GenBank) putative ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ksk  Kitasatospora setae
Pathway
ksk03420  Nucleotide excision repair
ksk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ksk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    KSE_48860
   03430 Mismatch repair
    KSE_48860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ksk03400]
    KSE_48860
Enzymes [BR:ksk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KSE_48860
DNA repair and recombination proteins [BR:ksk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KSE_48860
   MMR (mismatch excision repair)
    Other MMR factors
     KSE_48860
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 AAA_30 UvrD_C_2
Other DBs
NCBI-ProteinID: BAJ30664
UniProt: E4NGN4
LinkDB
Position
5397479..5400700
AA seq 1073 aa
MSSTEPLRHPEQLRDLLGIPFNDEQVAAIGAPMAPGVIVAGAGSGKTTVMAARVVWLVGS
GAVRPEQVLGLTFTNKAAGELAERVRAALLRAGVRAEDEDALGDPQISTYHAFAGTLLKE
HGLRLGIEPDVRLLADATRFQLAARVLRQARGPFPALTGTFSALVAELVALDSELAEHLV
EPARLREHDEELLDQLAGVKLTNDDLRAVPKAARGRQELLRLVEDYRARKQKLGLLDFGD
QIAASARLAQQRPEVGRLLREQYRVVLLDEYQDTSVAQRLMLAGLFGGESGAGHPVTAVG
DPCQAIYGWRGASVANLDDFPRHFPLADGGPAHRFALSENRRSGGRLLDLANRLATPLRA
MHEGVEALRPAPGAERDGSARVALLPTHAAEIDWLADSIAHLVRTGTAPGRIAVLCRAGG
SFPDIHAALVERKVPVEVVGLGGLLQLPEVADLVAVCEVLQDPTANAALVRLLIGPRWRT
GPRDLALLGRRAAELVRTARPGEQDALSAAVAETDPTEVVSLADALETFVDAEQPDDLPF
SPEARVRFARFAREIRELRRALAEPLMDVLHRVLTATGLEVELSASPLALAARRRETLHS
FLDIAASFADLDGDPGLAAFLGFLRAAQEYERGLDAGLPGGEDTVKVLTAHKSKGLEWDV
VAVPGLVKGAFPSKKGRDSWTSTRKVLPHALRGDAATLPADPAWDAKGLGRFKQEMTEHA
GVEELRLGYVAFTRPRTLLLASGHWWGPTQKTRRGPSDFLTALREHCERPGNGEIEHWAE
PPGKDEKNPALDVSVETPWPLPLDPDAQRARRRVAQVVRHRLAGAPAPEGEPMAVEDQRL
LASWDRDLTALLGELERSRRTTRDVELPASLSATQLMRLAADPDGFARDLARPMPRPPAP
AARRGTRFHAWVQSRYDQPLLLGPEALPGLDEEEIEDERDLERLKDAFLRGPYARRTPYA
VEAPFQLVLAGRVVRGRIDAVYRAAEGGAGGAGGAGGAGAGAPRYEVVDWKTGREDSGDP
LQLAVYRLAWAEQAGVAVEEVAASFCYVRSGRVETPSGLPGRKELSDLLIGNR
NT seq 3222 nt   +upstreamnt  +downstreamnt
atgtcgtcgactgagccgctgcggcacccggagcagctccgcgacctgctcggcatcccg
ttcaacgacgagcaggtggcggcgatcggcgcgccgatggcccccggcgtgatcgtggcc
ggcgcgggctccggcaagaccaccgtgatggccgcccgggtggtctggctggtcggctcc
ggcgcggtccgccccgagcaggtgctcggcctgaccttcaccaacaaggcggccggcgaa
ctcgccgaacgcgtccgggccgccctgctgcgggccggcgtccgcgccgaggacgaggac
gccctcggcgacccgcagatctccacctaccacgccttcgccggcaccctgctcaaggag
cacggcctgcggctgggcatcgaacccgacgtccggctgctggccgacgccacccgcttc
cagctcgccgcccgcgtcctgcgccaggcccgcggcccgttcccggcgctcaccggcacc
ttctccgcgctggtcgccgaactcgtcgcgctggactccgaactcgccgagcacctggtc
gagccggcccggctgcgggagcacgacgaggaactactggaccagctggccggcgtcaaa
ctgaccaacgacgacctgcgggccgtcccgaaggccgcccgcggccggcaggaactgctc
cggctggtcgaggactaccgggcccgcaagcagaagctcggcctgctcgacttcggcgac
cagatcgccgcctccgcccggctcgcccagcagcgccccgaggtcggccggctgctgcgc
gagcagtaccgggtggtgctgctggacgagtaccaggacacctcggtcgcccaacgcctc
atgctggcgggcctgttcggcggcgagtcgggcgccgggcacccggtcaccgcggtcggc
gacccctgccaggcgatctacggctggcgcggcgcctcggtcgccaacctggacgacttc
ccccggcacttcccgctcgccgacggcggcccggcgcaccgcttcgcgctcagcgagaac
cgccgcagcggcggccggctgctcgacctcgccaaccggctggccaccccgctgcgcgcc
atgcacgagggcgtcgaggcgctgcggcccgcccccggcgccgagcgggacggctccgcc
cgggtcgcgctgctgcccacccacgccgccgagatcgactggctggccgactcgatcgcc
cacctggtgcgcaccggcaccgcgcccggccggatcgccgtgctctgtcgggccggcggc
tccttccccgacatccacgccgcgctggtcgaacggaaggtcccggtcgaggtggtcggc
ctcggcggactgctgcaactcccggaggtggccgacctggtggcggtctgcgaggtcctc
caggacccgaccgcgaacgccgccctggtccggctgctgatcggcccgcgctggcgcacc
ggcccgcgcgacctggcgctgctcggccgccgcgccgccgaactcgtccgcaccgcccgc
cccggcgagcaggacgcgctgagcgccgccgtcgccgagaccgaccccaccgaggtggtc
tcgctggccgacgcgctggagaccttcgtcgacgccgagcagcccgacgacctgccgttc
tcgccggaggcccgggtgcggttcgcccggttcgcccgggagatccgcgaactgcgccgg
gcgctcgccgaaccgctgatggacgtcctgcaccgggtgctcaccgccaccggcctggag
gtcgaactctccgcctccccgctggcgctggccgcccgccggcgcgagaccctgcactcc
ttcctggacatcgccgcctccttcgccgacctggacggcgaccccggcctggccgccttc
ctcggcttcctgcgcgccgcccaggagtacgagcgcggcctggacgcgggcctgcccggc
ggcgaggacaccgtcaaggtgctcaccgcgcacaagtccaagggcctggagtgggacgtg
gtcgccgtccccggcctggtcaagggggcgttcccgtccaagaagggccgcgacagctgg
acctccacccgcaaggtgctgccgcacgccctgcgcggcgacgccgccaccctgcccgcc
gacccggcctgggacgccaagggcctcggccggttcaagcaggagatgaccgagcacgcc
ggggtcgaggaactgcggctcggctacgtcgcgttcacccggccgcgcacgctgctgctg
gcctccgggcactggtgggggccgacccagaagacccggcgcgggccgtcggacttcctg
accgcgctgcgcgagcactgcgagcgaccgggcaacggcgagatcgagcactgggccgag
ccgcccggcaaggacgagaagaaccccgcgctggacgtctcggtggagaccccctggccg
ctgccgctcgacccggacgcgcagcgcgcccgccgccgggtcgcccaggtggtccggcac
cggctggccggcgcgcccgcgccggagggcgagccgatggccgtcgaggaccagcggctg
ctggcctcctgggaccgcgacctgaccgcgctgctcggcgagttggagcgctcccggcgc
accacccgggacgtcgagctgcccgcctcgctctccgccacccagctgatgcggctggcc
gccgacccggacggcttcgcccgcgacctggcccgcccgatgccccgcccgcccgcgccc
gccgcccgccgcggcacccgcttccacgcctgggtgcagtcccgctacgaccagccgctg
ctgctcggccccgaggcgctgcccggcctggacgaggaggagatcgaggacgagcgcgac
ctggagcgcctcaaggacgccttcctgcgcggcccgtacgcccgccgcaccccgtacgcg
gtcgaggcgccgttccaactggtgctggccggccgggtggtgcgcggccggatcgacgcg
gtctaccgggccgccgagggcggggcgggcggggcggggggtgcgggcggggccggcgcg
ggggcgccgcgctacgaggtggtcgactggaagaccggccgcgaggactccggcgacccg
ctccaactggccgtctaccggctggcctgggccgagcaggcgggcgtcgcggtggaggag
gtggccgcctcgttctgctacgtgcgctccgggcgggtcgaaaccccgtcaggacttcct
ggccgaaaagagttgagcgatcttctgatcgggaataggtag

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