Kitasatospora setae: KSE_49450
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Entry
KSE_49450 CDS
T01648
Symbol
sigH
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ksk
Kitasatospora setae
Brite
KEGG Orthology (KO) [BR:
ksk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ksk03021
]
KSE_49450 (sigH)
Transcription machinery [BR:
ksk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KSE_49450 (sigH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_10
HTH_Crp_2
HTH_3
Sigma70_ECF
MarR_2
HTH_24
NirdL-like_HTH
IF2_N
HTH_28
MarR
GlnE
DUF7343
HTH_AraC
DinB_2
Zincin_1
Motif
Other DBs
NCBI-ProteinID:
BAJ30723
UniProt:
E4NGU3
LinkDB
All DBs
Position
complement(5471736..5472818)
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AA seq
360 aa
AA seq
DB search
MSDLDRTVAVVPPQASVARTATPDDALPKDSHRMSQPTDPKPERPEPAPAAEPVVPPAAD
GAPADGATTDDALTDGTPAGGSPAAADDAPVAAAEAVRSTVPAQGHRSGAPDREAARALF
VRLSELPEGSAERVEIRNQLVRMHIPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDRF
DHERGVEFSTYATPTIVGEIKRHFRDKGWAVRVPRRLQELRLSLTTATSELSQRHGRSPT
VHELAEHLGISEEDVLEGLESANAYSTLSLDVPDSDDESPAVADTLGATDEALEGVEYRE
SLKPLLAQLPPREQKILVLRFFRNMTQSQIAAEVGISQMHVSRLLARTLAQLREKLLVEE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgatctggaccgcacagttgccgtcgtaccgccgcaggcgagcgtcgcccgcacc
gccacacctgacgatgccctcccgaaggactcccaccggatgagccagccgaccgatccg
aagcccgagcggcccgagccggcgcccgctgccgagcccgtcgtcccgcccgcggcggac
ggcgctccggcggacggcgccacgaccgacgacgccctgaccgacggcaccccggccggc
ggcagcccggcggcggccgacgacgccccggtggcggcggccgaggccgtccgctccacc
gtgccggcgcaggggcaccgcagcggcgccccggaccgcgaggcggcccgggcgctgttc
gtgcggctgtccgagctgccggaggggtcggcggagcgggtggagatccgcaaccagctg
gtccggatgcacatcccgctggtggagcacctggcccggcgcttccgcaaccgcggcgaa
ccgctggacgacctgacccaggtcgccaccatcggcctgatcaagtcggtggaccggttc
gaccacgagcgcggggtggagttctccacgtacgcgacgccgaccatcgtcggcgagatc
aagcggcacttccgcgacaagggctgggcggtccgggtgccgcgccggctgcaggagctg
cggctgtcgctgaccacggcgaccagcgagctgtcccagcggcacggccggtcgccgacg
gtgcacgagctggccgagcacctgggcatctcggaggaggacgtgctggagggcctggag
tccgccaacgcgtactccacgctctcgctggacgtcccggacagcgacgacgagtcgccg
gccgtggcggacaccctgggcgccaccgacgaggcgctggagggcgtcgagtaccgcgag
tcgctgaagccgctgctggcccaactgccgccccgggagcagaagatcctggtgctgcgg
ttcttccggaacatgacccagtcgcagatcgcggccgaggtcggcatctcccagatgcac
gtctcccggctgctcgcccgcaccctcgcgcagctgcgcgagaagctgctggtcgaggag
tga
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