KEGG   Kitasatospora setae: KSE_53110
Entry
KSE_53110         CDS       T01648                                 
Symbol
truB
Name
(GenBank) putative tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
ksk  Kitasatospora setae
Brite
KEGG Orthology (KO) [BR:ksk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ksk03016]
    KSE_53110 (truB)
Enzymes [BR:ksk01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     KSE_53110 (truB)
Transfer RNA biogenesis [BR:ksk03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    KSE_53110 (truB)
 Prokaryotic type
    KSE_53110 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2
Other DBs
NCBI-ProteinID: BAJ31087
UniProt: E4NHV7
LinkDB
Position
5897672..5898577
AA seq 301 aa
MKRKGTGPDGLVIVDKPEGITSHGVVAKLRWLAGTRKVGHAGTLDPMATGVLVIGVERAT
RLLGHLMLTAKTYEATIRLGQTTVTDDREGEVTASVPADGVTPEAVDAQVAELTGEIMQV
PSKVSAIKIDGKRSYARVREGEEFELAARPTTVHAFTVHERRAAVAEDGTPVLDLDVTVE
CSSGTYIRALARDLGAALGVGGHLTALRRTRVGPYAVESAHTLEQLEEKLEVLPIAEAAA
AAFPRWDVDAEQARLLSNGMRLDAPGLGADGPIAVFDPDGRFLALIEESGGKAKPVAVFV
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaagcgtaaagggacgggccccgacgggctggtcatcgtcgacaagccggagggcatc
acctcgcacggggtggtcgccaagctgcgctggctggccgggacccggaaggtcgggcac
gcgggcaccctcgacccgatggccaccggagtcctggtgatcggcgtcgagcgggccacc
cggctgctcgggcacctgatgctcaccgccaagacctacgaggcgacgatccggctcggc
cagaccacggtcaccgacgaccgggagggcgaggtcaccgcctccgtcccggccgacggc
gtgacccccgaggccgtcgacgcccaggtcgccgagctcaccggcgagatcatgcaggtg
ccgtccaaggtcagcgcgatcaagatcgacggcaagcgctcgtacgcccgggtccgggag
ggcgaggagttcgagctcgccgcccggccgaccaccgtgcacgcgttcaccgtgcacgag
cggcgggcggccgtcgccgaggacggcacgccggtgctcgacctcgacgtcaccgtcgag
tgctcctccgggacgtacatccgggcgctggcccgcgacctcggcgcggcgctcggcgtc
ggcgggcacctgaccgcgctgcggcgcaccagggtcgggccgtacgcggtcgagtcggcg
cacaccctggagcagttggaggagaagctggaggtgctgcccatcgccgaggccgcggcc
gccgccttcccgcgctgggacgtcgacgccgaacaggcccggctgctctccaacggcatg
cggctggacgcgcccgggctcggcgccgacgggccgatcgcggtcttcgacccggacggg
cggttcctggcgctgatcgaggagagcggcgggaaggccaagccggtcgcggtgttcgtc
ggctga

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