KEGG   Kitasatospora setae: KSE_55080
Entry
KSE_55080         CDS       T01648                                 
Symbol
rnd
Name
(GenBank) putative ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
ksk  Kitasatospora setae
Brite
KEGG Orthology (KO) [BR:ksk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ksk03016]
    KSE_55080 (rnd)
Enzymes [BR:ksk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     KSE_55080 (rnd)
Transfer RNA biogenesis [BR:ksk03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    KSE_55080 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: BAJ31283
UniProt: E4NIF3
LinkDB
Position
complement(6170116..6171351)
AA seq 411 aa
MTDAVASIPEETAPVPLLEPRDGLPPVVSDDAALAAVVEAFRGGTGPVAVDAERASGYRY
GQRAYLIQLRRQGAGTALIDPIACPDLTGLNAALADTEWVVHAATQDLPCLFEVGMHPGV
LFDTELAGRLAGFPRVGLGPMTENVLGLSLAKEHSAVDWSTRPLPEPWLRYAALDVEVLV
DLRDALEAELDRQGKLDWAHQEFAALAAAPRPAPRVDPWRRTSQLHKVRRRRQLAAVREM
WLTRDRIARERDVSPGRVLADAAIVNAALAMPLNAPALVAVQGFGPRVNRRQLDQWLAAI
ERAREIPEAALPPATAPHDGPPPPRAWAEKDPVAAARLSGARAAVTALAERHHLPAENLI
APDLVRRVSWEPPAEQDPVAIGAALRALGARAWQTELVGPVLAEAFREAAA
NT seq 1236 nt   +upstreamnt  +downstreamnt
gtgaccgacgccgtagcctccatccccgaagagaccgccccggttccgctcctcgaaccc
cgggacggactgccaccggtggtgtcggacgacgcggccctcgccgccgtcgtcgaggcc
ttccgcggcggcaccgggccggtcgccgtcgacgccgagcgggcctccggctaccgctac
gggcagcgcgcctacctgatccagctgcgccgccagggcgcgggcaccgcgctgatcgac
ccgatcgcctgccccgacctgaccggcctgaacgcggcgctcgccgacaccgagtgggtc
gtgcacgccgccacccaggacctgccctgcctgttcgaggtcggcatgcaccccggggtg
ctgttcgacaccgagctggccggccggctcgccgggttcccccgggtcggcctcggcccg
atgaccgagaacgtgctgggcctgtcgctggccaaggagcactccgcggtcgactggtcc
acccgcccgctgcccgagccctggctgcgctacgccgcgctggacgtcgaggtgctggtc
gacctgcgggacgcgctggaggcggagctcgaccggcagggcaaactcgactgggcgcac
caggagttcgccgcgctcgccgccgcgccgcggcccgccccccgggtcgacccgtggcgg
cgcacctcgcagctgcacaaggtccgccgccgccggcagctggccgccgtccgcgagatg
tggctgacccgggaccggatcgcccgcgagcgggacgtctcgcccggccgggtgctggcc
gacgccgcgatcgtgaacgccgcgctcgccatgccgctgaacgcgcccgcgctggtcgcc
gtgcagggcttcgggccgcgggtgaaccggcggcagctcgaccagtggctggccgcgatc
gagcgggcccgggagatcccggaggccgcgctgccgccggccaccgccccgcacgacggc
ccgccgccgccgcgggcctgggccgagaaggacccggtggccgcggcccggctcagcggc
gcccgcgccgccgtcaccgcgctggccgagcggcaccacctgcccgccgagaacctgatc
gcgcccgacctggtccgccgggtctcctgggagccgccggccgagcaggacccggtggcg
atcggcgccgcactgcgggcgctgggcgcccgggcctggcagaccgagctggtcgggccg
gtgctggcggaggcgttccgggaggccgcggcgtag

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