Kitasatospora setae: KSE_59330
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Entry
KSE_59330 CDS
T01648
Symbol
dnaE2
Name
(GenBank) putative DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ksk
Kitasatospora setae
Pathway
ksk03030
DNA replication
ksk03430
Mismatch repair
ksk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ksk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KSE_59330 (dnaE2)
03430 Mismatch repair
KSE_59330 (dnaE2)
03440 Homologous recombination
KSE_59330 (dnaE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ksk03032
]
KSE_59330 (dnaE2)
03400 DNA repair and recombination proteins [BR:
ksk03400
]
KSE_59330 (dnaE2)
Enzymes [BR:
ksk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KSE_59330 (dnaE2)
DNA replication proteins [BR:
ksk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KSE_59330 (dnaE2)
DNA repair and recombination proteins [BR:
ksk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KSE_59330 (dnaE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
B1
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BAJ31703
UniProt:
E4N0L9
LinkDB
All DBs
Position
complement(6649967..6653518)
Genome browser
AA seq
1183 aa
AA seq
DB search
MADSFAHLHVHTEYSMLDGAAKNGKLFAEAERLGMPAIAMSDHGNMFGAYEFFHAAAKSA
VKPIIGIEAYVAPSSRFLKKQVFWAPGGQRPTGSDGEGGKDVSGGGRYTHMTMWAQNATG
LRNLFKLSSLASMEGYYMKPRMDRELIAANATGIIATTGCPSGEVQTRLRLGQYEEAVKA
AGAYQDIFGKENYFLELMDHGLSIERDVRADLLRLAKELGIPLLATNDSHYVTADQADAH
DSLLCVGVGKNKDDPNRFKFNGSGYYVKTSEEMRELFRDLPEACDNTLAIAERIESYEEV
FTYVDRMPQFDVPEGETQASFLRKKIAAGLQHRYGDNPSQEVLDRVELEMGVITPMGFDA
YFLVVADICQYGRDNGIPVGPGRGSAAGSMVSYLTGITQLDPLEHDLLFERFLNPERINP
PDVDIDFDDRQRDQMVRYVTDKYGSAYTAQVNTFGTIKAKAAVKDANRILGYPFSMGDRI
TKAMPPDVMGKGVPLADLFNEKHPRYNEGTEIRSLYENEPDVKKIIDTGLGIEGLIRGTG
VHAAAVILSSTPLLELIPLHMRDKDGTIITGFDYPSCEAMGLIKMDFLGLRNLGIIDHCI
KIVKANRGVDVDIDNIPIDDPTTYQLLARGDTLGVFQLDGGPMRALLRLMKPTEFADISA
VSALYRPGPMGMNSHTNYALRKNGQQEIIPIHPELEEPLKEVLGPTYGLIVYQEQVQRAA
QVLAGYSLGQADLLRRAMGKKKKEVLEKEFVPFHAGCKERGYSDEAIQAVWDVLVPFAGY
AFNKSHSAAYGLVSYQTAYLKANYPAEYMAALLTSVADDKDKMAIYLAECRAMGIRILSP
DVNESVVDFTAVGSDVRFGLKAVRNVGVPVIESLVATREAKGKYTSFADFLDKVELVVCN
KRTVDSLVKAGAFDSLGHTRLSLSTVHESAIDAVTGVKKQQAIGQDDLFAMLGGDDTPAI
GLDFQLTDREWPRKQLLGLEREMLGLYVSSHPLDGAEHILTKNRDVSLVDLLNSGRTEGE
VRLSGLITGVDRRINKAGNAWAIITLADRDGSIEVLFFPAAYQLMSAQMVEDNVIAVRGR
LNERDGSLSIFGQEITTLDMSSAELGTKPPVQITAPVGRLTPDVVAELKATLQAHPGDVP
IRLLTTGWDKNTLYELGFTVNPDNGLASDIKTFLGPHCWQGTV
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacagcttcgcccacctgcacgtccacaccgagtactcgatgctggacggcgcc
gcgaagaacgggaagctcttcgcagaggcggagagactggggatgcccgcgatcgcgatg
agcgaccacggcaacatgttcggcgcgtacgagttcttccacgcggccgcgaagagcgcg
gtgaagccgatcatcggcatcgaggcgtacgtggcgccgtcctcgcggttcctgaagaag
caggtgttctgggcgccgggcggccagcgcccgaccggctcggacggcgagggcggcaag
gacgtctccggcggcggccggtacacccacatgacgatgtgggcgcagaacgcgaccggg
ctgcgcaacctgttcaagctctcctcgctggcttcgatggagggctactacatgaagccc
cggatggaccgggagctgatcgccgccaacgccaccggcatcatcgccaccaccggctgc
ccgtccggcgaggtgcagacccggctgcggctgggccagtacgaggaggcggtcaaggcg
gcgggcgcctaccaggacatcttcggcaaggagaactacttcctggagctgatggaccac
ggcctgtccatcgagcgggacgtccgcgccgacctgctgcggctcgccaaggagctgggc
atcccgctgctggccaccaacgactcgcactacgtcacggccgaccaggccgacgcgcac
gacagcctgctctgcgtcggcgtgggcaagaacaaggacgacccgaaccggttcaagttc
aacggctccggctactacgtgaagacctccgaggagatgcgcgagctgttccgcgacctc
ccggaggcgtgcgacaacaccctcgccatcgccgagcggatcgagtcgtacgaggaggtc
ttcacctacgtcgaccggatgccgcagttcgacgtgcccgagggcgagacccaggcgtcc
ttcctgcgcaagaagatcgccgccggcctgcagcaccgctacggcgacaacccgagccag
gaggtgctggaccgggtcgagctggagatgggcgtgatcaccccgatggggttcgacgcc
tacttcctcgtggtcgccgacatctgccagtacggccgcgacaacggcatcccggtcggc
ccgggccgaggctcggcggccggctcgatggtctcctacctgaccggcatcacccagctc
gacccgctggagcacgacctgctgttcgagcggttcctcaaccccgagcgcatcaacccg
ccggacgtcgacatcgacttcgacgaccgccagcgcgaccagatggtgcgctacgtcacc
gacaagtacggctccgcgtacaccgcgcaggtcaacaccttcggcaccatcaaggcgaag
gccgccgtcaaggacgccaaccggatcctcggctacccgttctcgatgggcgaccggatc
accaaggcgatgccgccggacgtgatgggcaagggcgtcccgctcgccgacctgttcaac
gagaagcacccccggtacaacgagggcaccgagatccgctcgctgtacgagaacgagccg
gacgtcaagaagatcatcgacaccggcctcggcatcgagggcctgatccgcggcaccggc
gtgcacgcggccgcggtgatcctctcctccacgccgctgctcgaactgatcccgctgcac
atgcgggacaaggacggcaccatcatcaccggcttcgactacccgtcgtgcgaagccatg
ggcctgatcaagatggacttcctgggtctgcggaacctgggcatcatcgaccactgcatc
aagatcgtgaaggccaaccggggcgtcgacgtcgacatcgacaacatcccgatcgacgac
cccaccacctaccagctgctcgcccgcggcgacaccctcggcgtcttccagctcgacggc
ggcccgatgcgcgccctgctgcgcctgatgaagcccaccgagttcgccgacatctccgcc
gtctccgcgctgtaccggcccggcccgatgggcatgaactcgcacaccaactacgcgctg
cgcaagaacggccagcaggagatcatcccgatccaccccgagctggaggagcccctcaag
gaggtcctcggccccacctacggcctgatcgtctaccaggagcaggtgcagcgcgccgcc
caggtgctggccggctactcgctcggccaggccgacctgctgcgccgcgcgatgggcaag
aagaagaaggaggtgctggagaaggagttcgtgccgttccacgcgggctgcaaggagcgc
ggctactcggacgaggcgatccaggcggtctgggacgtgctggtcccgttcgccggctac
gccttcaacaagtcgcactccgccgcgtacggcctggtctcctaccagaccgcctacctg
aaggcgaactaccccgccgagtacatggccgccctgctcacctcggtcgccgacgacaag
gacaagatggcgatctacctggccgagtgccgggcgatgggcatccggatcctctccccc
gacgtcaacgagtccgtcgtcgacttcaccgccgtcggcagcgacgtccgcttcggcctg
aaggcggtgcgcaacgtcggcgtcccggtgatcgagtcactggtcgccacccgggaggcc
aagggcaagtacacctccttcgccgacttcctcgacaaggtcgaactggtcgtctgcaac
aagcgcaccgtcgactccctggtcaaggccggcgccttcgactccctcggccacacccgg
ctctccctcagcaccgtccacgagagcgccatcgacgccgtcaccggcgtcaagaagcag
caggccatcggccaggacgacctgttcgcgatgctcggcggcgacgacacccccgccatc
ggcctcgacttccaactcaccgaccgcgaatggccgcgcaagcaactcctcggcctggaa
cgcgagatgctcggcctctacgtctccagccacccgctggacggcgccgagcacatcctc
accaagaaccgcgacgtctccctcgtcgacctcctcaactccggccgcaccgaaggcgag
gtccgactctccggcctgatcaccggcgtcgaccgccggatcaacaaggccggcaacgcc
tgggcgatcatcaccctcgccgaccgcgacggctccatcgaggtgctcttcttccccgcc
gcctaccagctgatgtccgcccagatggtcgaggacaacgtcatcgccgtccgcggccgc
ctcaacgaacgcgacggctccctcagcatcttcggccaggagatcaccaccctcgacatg
tcctccgccgaactcggcaccaaaccccccgtccagatcaccgcccccgtcggccgcctc
acccccgacgtcgtcgccgaactcaaagccaccctccaagcccaccccggcgacgtcccg
atccgcctcctcaccaccggctgggacaagaacaccctctacgaactcggcttcaccgtg
aaccccgacaacggcctcgcctccgacatcaagaccttcctcggcccgcactgctggcag
ggcaccgtctga
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