Kitasatospora setae: KSE_74520
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Entry
KSE_74520 CDS
T01648
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ksk
Kitasatospora setae
Brite
KEGG Orthology (KO) [BR:
ksk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ksk03021
]
KSE_74520
Transcription machinery [BR:
ksk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KSE_74520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR_2
HTH_23
HTH_24
NirdL-like_HTH
MarR
HTH_3
HTH_37
IF2_N
DUF7343
UBA_2
HTH_31
Motif
Other DBs
NCBI-ProteinID:
BAJ33207
UniProt:
E4NJQ9
LinkDB
All DBs
Position
8515283..8516173
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AA seq
296 aa
AA seq
DB search
MTSNQLLMAAPHPVNDHVRTAPPRGSREFAPELAELGDLTEVAPTDARDLTRVLLARLAG
LEEGTREYSYVRASLVELNLSLVRFALRRFGSHRESTEDLMQVGAVGLIKAIDRFETERG
LEFTTFAIPTILGELRRHFRDTTWAVHVPRRLQELRLALVKAQDALSQALDRAPTVAELS
EHLGITQEEVIEGLQAANAHSTDSLDLPAGPDDDGPGALAAKIGGTDERLGMVEDLVSLQ
PLIAALPERDRLILSMRFTEELTQSQIGERLGLSQMHVSRLLSRTLAKLRQGLEAA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgacgagcaaccagctcctgatggcagcgccccacccggtgaacgaccacgtgcgcacc
gcaccgccgcgcggctcccgggagttcgcaccggagctggcggagctcggcgacctgacg
gaggtcgcgccgaccgacgcccgcgacctgacccgggtgctgctggcgcgcctggccggc
ctcgaggagggcacccgggagtactcctacgtacgggcctccctggtggagctcaacctc
tccctggtccgcttcgcccttcgccgcttcggctcgcaccgcgagagcaccgaggacctg
atgcaggtcggcgcggtcgggctgatcaaggccatcgaccgcttcgagaccgagcgcggc
ctggagttcaccaccttcgccatccccaccatcctcggggagctgcgccggcacttccgc
gacaccacctgggccgtccacgtgccccgccgcctccaggagctgcgcctggccctggtc
aaggcccaggacgccctgtcccaggccctcgaccgggcgccgacggtggccgagctgtcc
gagcacctggggatcacgcaggaggaggtcatcgaggggctgcaggccgcgaacgcgcac
agcaccgactccctcgacctgccggccgggcccgacgacgacggcccgggcgcactcgcc
gccaagatcggcggcaccgacgagcggctgggcatggtcgaggacctggtctcgctccag
cccctgatcgccgccctgccggagcgcgaccggctgatcctgtcgatgcgcttcaccgag
gaactgacgcagtcccagatcggcgaacgcctcggactgtcccagatgcacgtctcccgc
ctcctctcccgcacgctcgcgaagctgcgccagggcctcgaggcggcttga
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