Kribbella soli: OG809_04650
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Entry
OG809_04650 CDS
T09724
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ksl
Kribbella soli
Pathway
ksl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ksl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OG809_04650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ksl03000
]
OG809_04650
03400 DNA repair and recombination proteins [BR:
ksl03400
]
OG809_04650
Enzymes [BR:
ksl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
OG809_04650
Transcription factors [BR:
ksl03000
]
Prokaryotic type
Helix-turn-helix
AraC family
OG809_04650
DNA repair and recombination proteins [BR:
ksl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OG809_04650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HHH
HHH_5
DUF6233
Motif
Other DBs
NCBI-ProteinID:
WUJ72554
LinkDB
All DBs
Position
complement(930183..931652)
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AA seq
489 aa
AA seq
DB search
MYECRERCVRAVQSKDARFDGWFFTAVLTTKIYCRPSCPVVPPKVENMRFYPSAAAAQQA
GFRACKRCRPDASPGSPEWNDRADLVARAMRLIADGVVDRDGVPGLAGQLGYSVRQVQRQ
LLAELGAGPLALARAQRAQTARLLIETSNLQMADVAFAAGFSSVRTFNETVQEVFALSPT
ELRRRARRGTTTVAPGTISLRLPFRAPLTPDNLFGHLIATGVPGVEEWRDGHYRRTLRLP
HGHGVVALRPMPDHIACQLSLTDQRDLAIAISRCRRMLDLDADPIAVDDLLSEDPVLAPL
IVKAPGRRVPHTVDGEEFAVRAVLGQQVSTAAARTHAHRLVLQHGEPIEDATGGLTHLFP
TMQALAGLDPETLAFPKSRRTTLTTLIRTLADGEIDLGAGADWDRAREQLAALPGIGPWT
VESIAMRALGDPDAFVASDLGIRYAARDLGLPEAPKLLTDHARAWRPWRAYAVQYLWATG
DHAINKIPE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgagtgcagggagcgatgtgtccgggccgtccagtcgaaggacgcgcggttcgac
gggtggttcttcacggccgtcctgaccacgaagatctattgccggccgagctgcccggta
gtgccgccgaaggtcgagaacatgcggttctacccgagtgcggccgcggcgcagcaggcc
gggttccgcgcctgcaagcggtgccgtccggacgccagcccgggttccccggagtggaac
gaccgcgcggacctggtggcccgcgcgatgcgcctgatcgccgacggcgtcgtcgaccgc
gacggcgtgccggggctggctggtcagctcgggtacagcgtgcggcaggtgcagcggcaa
ctcctggctgagctcggcgccgggccgctcgcgctcgcccgggcgcagcgggcccagacc
gcgcgcctgctgatcgagacgagcaacctgcagatggcggatgtcgcgttcgccgccggg
ttctcgagtgtgcggacgttcaacgagaccgtgcaggaggtcttcgcgctgtccccgacc
gagctgcgccgccgcgcccgccggggtacgacgactgtcgcgccgggcacgatctcgctg
cgtctcccgttccgcgctccgttgacgccggacaacctgttcggtcacctgatcgcgacc
ggcgtgccaggggtggaggagtggcgcgacggccactaccgccgcacgctgcgcctcccg
cacggtcacggcgtggtcgccttgcggccgatgcccgaccacattgcgtgtcagctctcg
ctcaccgatcagcgcgatctcgcgatcgcgatcagccgttgccggcggatgctcgacctc
gacgcggatccgatcgcggtcgacgacctgctcagcgaggatccggtcctcgcgccgttg
atcgtgaaggcgccgggacgccgggttccgcacacggtcgacggcgaggagttcgccgta
cgcgctgtgctcggtcagcaggtgtcgaccgcggccgcccggacgcacgctcatcggctg
gtcctgcagcacggtgagccgatcgaggacgcgaccggcgggctgacgcatctgttcccg
acgatgcaggcgctggccgggctcgatccggagacgctggcgtttccgaaatcccggcgt
acgacgttgacgaccctgatccggacgctggccgacggggagatcgatctcggcgccggt
gcggactgggatcgtgcccgcgagcaactcgcggcgctgccggggatcgggccgtggacg
gtcgaatcgatcgcgatgcgcgcgctcggcgacccggatgcctttgtggccagtgattta
ggtatccgctacgccgcccgtgacctaggcttgcccgaggcccccaaactcctgaccgac
cacgcccgggcgtggcggccttggcgtgcgtacgccgtccagtacttgtgggccaccggt
gaccacgcgatcaacaagattccggagtga
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