Kribbella soli: OG809_05200
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Entry
OG809_05200 CDS
T09724
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ksl
Kribbella soli
Pathway
ksl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ksl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OG809_05200
09124 Replication and repair
03420 Nucleotide excision repair
OG809_05200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ksl03021
]
OG809_05200
03400 DNA repair and recombination proteins [BR:
ksl03400
]
OG809_05200
Enzymes [BR:
ksl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OG809_05200
Transcription machinery [BR:
ksl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
OG809_05200
DNA repair and recombination proteins [BR:
ksl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
OG809_05200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Eno-Rase_FAD_bd
Tfb5
Motif
Other DBs
NCBI-ProteinID:
WUJ72662
LinkDB
All DBs
Position
1041027..1042667
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AA seq
546 aa
AA seq
DB search
MTDGPLIVQSDKTLLLETAHAEANECRKAIAPFSELERAPEHVHTYRLTPLGLWNARAAG
HDAEQVIDVLLRYSRYPVPHSLLVDIAETLDRYGRLRLEKHPQHGLVLITTDRPVLEEVL
RSNKVKPMLGERIDDDTVLVHPSERGHLKQTLLKLGWPAEDLAGYVDGEAHKIGLKLDGW
EMRPYQQQAVDSFWHGGSGVVVLPCGAGKTIVGAAAMAQASATTLILVTNTVSARQWKDE
LLKRTSLTEEEIGEYSGARKEIRPVTIATYQVMTTRRKGVYTHLELFDARDWGLIVYDEV
HLLPAPIFRMTADLQTRRRIGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
ADCIEVRVDLEQTERFVYATAEPEDRYRLAASTPAKSRLVRRIADHHAGEPLLVIGQYID
QLDELGERLECPVIKGETTVKERQRLFQAFRTGEINRLVVSKVANFSIDLPEASVAIQVS
GTFGSRQEEAQRLGRVLRPKGDGRTARFYSIVARDTIDAEFAAHRQRFLAEQGYAYTIVD
AENLFA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
gtgacagacggtccactgatcgtgcagtcggacaagacgttgttgttggagaccgcacat
gcggaggccaacgagtgtcggaaggctattgcgccgttctccgagctggagcgagcgccg
gagcatgtgcacacctatcggctgacaccgctggggttgtggaacgcgcgggccgccggg
cacgacgcggagcaggtgatcgacgtactgctgcgctacagtcgctacccggtcccccac
tcgctgctggtcgacatcgccgagacactggaccggtacgggcgtctgcggctggagaag
cacccgcagcacggactggtactgatcacgaccgaccggccggtgctggaggaggtgctg
cgcagcaacaaggtcaagccgatgctgggcgaacgcatcgacgacgacaccgtgctggtg
cacccgtcggagcgcggccacctcaagcaaaccctgctgaagctcggctggccggctgag
gacctggccgggtacgtcgacggcgaggcgcacaagatcggtctcaagctggacggctgg
gagatgcgcccgtaccagcagcaggcggtcgactcgttctggcacggcggctccggtgtc
gtcgtactgccttgtggggcgggcaagacgatcgtcggcgcggccgcgatggcgcaggcg
tccgcgaccacgctgatcctcgtcaccaacaccgtctccgcccggcagtggaaggacgag
ctgctcaagcggaccagcctgaccgaggaggagatcggcgagtactccggtgcgcgcaag
gagatccggccggtcacgatcgcgacgtaccaggtgatgacgacgcgccggaagggcgtc
tacacgcacctggagctgttcgacgcccgcgactggggcctgatcgtgtacgacgaggtg
cacctgctgcccgcgccgatcttccggatgaccgccgacctgcagacccggcgccggatc
ggtctgaccgcgacgctggtccgcgaggacggccgcgagggcgacgtgttctcgctgatc
ggcccgaagcggtacgacgctccgtggaaggacatcgaggcgcagggctggatcgcgccg
gccgactgcatcgaggtccgggtggatctcgagcagaccgagcggttcgtgtacgcgacc
gccgagcccgaggaccgctaccgcctggccgcctccacgccggcgaagtcgcggctggta
cgacggatcgccgaccaccatgcgggtgagccgctgctcgtcatcggtcagtacatcgac
cagttggacgagctcggcgagcgcctggagtgcccggtgatcaagggcgagacgaccgtg
aaggaacggcagcgactgttccaggccttccggaccggtgagatcaaccggctggtggtc
tccaaggtcgcgaacttctccatcgacctccccgaggcgtcggtcgccatccaggtctcc
ggcaccttcggctcccgccaggaagaggcccagcgcctgggccgggtcctccgccccaag
ggcgacggccgcaccgcccgcttctactccatcgtcgcccgcgacaccatcgacgccgaa
ttcgccgcccaccgccaacgcttcctggccgaacagggctacgcctacacgatcgtggac
gcagagaacctctttgcatga
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