Kribbella soli: OG809_06320
Help
Entry
OG809_06320 CDS
T09724
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ksl
Kribbella soli
Pathway
ksl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ksl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OG809_06320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ksl03021
]
OG809_06320
03400 DNA repair and recombination proteins [BR:
ksl03400
]
OG809_06320
Enzymes [BR:
ksl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OG809_06320
Transcription machinery [BR:
ksl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OG809_06320
DNA repair and recombination proteins [BR:
ksl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OG809_06320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
WUJ72883
LinkDB
All DBs
Position
complement(1249993..1253853)
Genome browser
AA seq
1286 aa
AA seq
DB search
MLDVNFFDELRIGLATADEIRQWSHGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITDVDDEARHRDLSSLEGRVDVERKQLENRRDNDIEQRMKKLEED
LAQLEAEGAKADVRRKVKEGAEREVKQLRDRAQREIDRLDEVWTRFKNLKVQDLEGDEIL
YRAMKERFGKYFEGAMGAAAIQRRLETFDLKAEADNLRETIKTGKGQRKTRALKRLKVVT
AFLATNNSPMGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
AQVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQIHPLVCSAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSTNNILKPADGRPVTMPTQDMIIGIYFLTMLKDGAKGEGR
AFSSVAEAIMAFDRHELALQAKISLRLSGSAAPADAAELADGGFALETTLGRALFNEALP
ADYPFVDTEVGKKQLGGIVNDLAERYTKVEVAHALDALKDLGYYWSTRSGVTVSIDDFST
PPSKPEIMARYEAQAEKVQKQFERGLITSSERRQELIEIWTGANAEVGKAMEENFAKDNP
IWMMVHSGARGNMMQIRQISGMRGLVANPKGEIIARPIKSNFREGLSVVEYFIATHGARK
GLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLPKQIGEKDPSGKVVHAENVET
SAYARTLATDALDADGNVVLAGGADLGDVSIAKLVAAGIEEVKVRSVLTCDAKTGTCAKC
YGRSLATGKPVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITHGLPRVVELFEA
RQPKGKAPISEAAGRISIEDTDKTRKLVLTPDDGSEEVAYPVSKRGRLLIEEGQHVEVGQ
QLTQGTPDPQEVLRILGVRKAQEHLVDEVQEVYRSQGVAIHDKHIEIIVRQMLRRVTVIE
SGDAQLLPGELADRIMFEAENRRVVAEGGTPASGRPVLMGITKASLATESWLSAASFQET
TRVLTEAAIHGKSDSLVGLKENVIIGKLIPAGTGMDRYRNIRVEPTEEAKAAMYSMVGYE
SYDYDFGPSSGQSVPLDDFDLGSYQN
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtgaacttcttcgacgagcttcggatcggcctggcgaccgcggatgagatc
cgccagtggtcgcacggcgaggtcaagaagccggagacgatcaactaccggacgctcaag
cccgagcgtgacggtctcttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgcgttcgcttcaagggcatcatctgcgagcggtgtggcgtc
gaggtcacccgctccaaggtgcgccgcgagcggatgggccacatcgagctggccgcgccg
gtcacccacatctggtacttcaagggtgtcccgtcgcggctcggctacctgctcgacctc
gccccgaaggacctggagaaggtcatctacttcgcggcgtacatgatcaccgacgtcgac
gacgaggccaggcatcgcgacctgtcctcgctcgagggccgggtggacgtggagcgcaag
cagctcgagaaccgtcgtgacaacgacatcgagcagcggatgaagaagctcgaggaggac
ctggcgcagctcgaggccgagggcgccaaggccgacgtacgccgcaaggtgaaggaaggc
gccgagcgtgaggtcaagcagctgcgcgaccgtgcgcagcgcgagatcgaccgcctcgac
gaggtctggacccggttcaagaacctcaaggtccaggacctggagggcgacgagatcctg
taccgcgccatgaaggagcggttcggcaagtacttcgagggcgccatgggtgccgccgcg
atccagcgccggctggagaccttcgacctgaaggccgaggcggacaacctgcgcgagacg
atcaagaccggtaagggccagcgcaagacgcgtgccctgaagcggctcaaggtcgtcacg
gcgttcctggccaccaacaacagcccgatgggcatggtgctcgactgcgtcccggtgatc
ccgccggacctgcggccgatggttcagctcgacggtggccggttcgccacctcggacctg
aacgacctgtaccgccgggtgatcaaccggaacaaccggctcaagcggctgctcgacctg
ggcgcgccggagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggtcgtccggtcaccggcccgggcaaccggccgctgaag
tcgctgtccgacatgctcaagggcaagcagggtcgtttccgtcagaacctgctgggcaag
cgcgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctgaagctgcaccag
tgcggtctgccgaaggcgatggcgctggagctgttcaagccgttcgtgatgaagcggctg
gtcgacctcaaccacgcgcagaacatcaagtccgccaagcggatggtcgagcgtcagcgc
gcccaggtctgggacgtgctggaagaggtcatcaccgagcacccggttctgctcaaccgt
gcaccaaccctgcaccggctgggtatccaggcgttcgagccgcagctgatcgagggcaag
gcgatccagatccacccgctcgtctgctccgcgttcaacgcggacttcgacggtgaccag
atggcggtgcacctgccgctgtcggccgaggcgcaggccgaggcccggatcctgatgctg
tcgaccaacaacatcctgaagccggccgacggccgtccggtcacgatgccgacgcaggac
atgatcatcggcatctacttcctgacgatgctcaaggacggcgccaagggcgagggccgg
gccttcagctcggtggccgaggcgatcatggccttcgaccgccacgagctggcgctgcag
gccaagatctcgctgcggttgagcggttcggcggcaccggccgacgcggccgagctggcc
gacggcgggttcgcgctggagaccacgctgggccgggcgctgttcaacgaggcgctgccg
gcggactacccgttcgtcgacaccgaggtgggcaagaagcagctcggcgggatcgtcaac
gacctggcggagcggtacaccaaggtcgaggtcgcacacgccctcgacgcgctgaaggac
ctcggatactactggtccacccgttcgggtgtcaccgtgtcgatcgacgacttcagcacg
ccgccgtccaagccggagatcatggctcggtacgaggctcaggccgagaaggtccagaag
cagttcgagcggggtctgatcacctcgtccgagcggcgtcaggagctgatcgagatctgg
accggcgccaacgccgaggtcggtaaggcgatggaggagaacttcgccaaggacaacccg
atctggatgatggtgcactccggtgcccgaggcaacatgatgcagatccggcagatctcc
ggtatgcgtggtctggtggccaacccgaagggcgagatcatcgcccggccgatcaagtcc
aacttccgcgagggcctgtcggtggtcgagtacttcatcgccacccacggtgcgcggaag
ggtctggccgacaccgcgctgcggaccgccgactcgggttacctgacccgtcgtctggtg
gacgtctcgcaggacgtgatcatccgcgaggaggactgcggcaccgagcggggcctgccg
aagcagatcggcgagaaggacccgagcggcaaggtcgtccacgccgagaacgtggagacc
agcgcgtacgcgcggaccctggccaccgacgccctggacgccgacggcaacgtcgtgctc
gccggcggcgccgacctgggcgacgtgtcgatcgcgaagctggtcgcggccgggatcgaa
gaggtcaaggtccggtcggtgctcacctgtgacgccaagaccggtacctgcgcgaagtgc
tacggccgttcgctggcgaccggcaagccggtcgacatcggcgaggcggtcggcatcatc
gcggcccagtccatcggtgagccgggtacgcagctgacgatgcgtaccttccacaccggt
ggtgtcgcgggtgatgacatcacccacggtctgccgcgtgtggtcgagctgttcgaggcc
cgccagcccaagggcaaggcgccgatctcggaggccgccggccggatctcgatcgaggac
accgacaagacccggaagctggtgctcaccccggacgacggttccgaggaggtcgcctac
ccggtgtcgaagcgtggccgcctgctgatcgaagagggtcagcacgtcgaggtcggtcag
cagctgacgcagggtacgccggacccgcaggaggttctgcggatcctgggtgtccgcaag
gcgcaggagcacctggtggacgaggtccaggaggtgtaccggtcgcagggtgtggccatc
cacgacaagcacatcgagatcatcgtccggcagatgctgcgccgggtcacggtgatcgag
tcgggcgacgcccagctgctgccgggtgagctcgcggaccggatcatgttcgaggcggag
aaccgtcgcgtcgtggccgagggcggtacgccggcctcgggccgtccggtgctgatgggt
atcaccaaggcctcgctggcgaccgagtcgtggctgtcggccgcctccttccaggagacg
acccgcgtcctcaccgaggccgcgatccacggcaagtccgactcgctggtcggtctgaag
gagaacgtcatcatcggcaagctgatcccggccggtacgggcatggaccgttaccgcaac
atccgggtggagcccaccgaggaggcgaaggccgcgatgtactcgatggtcggctacgag
tcgtacgactacgacttcggcccgtcctcgggtcagtcggtcccgctcgacgacttcgac
ctcggttcctaccagaactga
DBGET
integrated database retrieval system
