Kribbella soli: OG809_08850
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Entry
OG809_08850 CDS
T09724
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ksl
Kribbella soli
Brite
KEGG Orthology (KO) [BR:
ksl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ksl03016
]
OG809_08850
Enzymes [BR:
ksl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
OG809_08850
Transfer RNA biogenesis [BR:
ksl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
OG809_08850
Prokaryotic type
tRNA splicing ligases
OG809_08850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WUJ73359
LinkDB
All DBs
Position
1758501..1759691
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AA seq
396 aa
AA seq
DB search
MELPIELSGAKSSTLMWAQEYDVDAKALQQLRNIAALPWVHGVRVMPDVHLGKGATVGSV
IAMYQAVSPAAVGVDIGCGMEGVLTSLTAADLPDDLSRIRSRIEAAVPVGFRSHGDPVGV
RRLGLDPRPWDRLWGAFTSLHDGVQDRERKAKQQMGSLGSGNHFIEVCLDDEDRVWLMLH
SGSRNIGKELAERHMRIARELPHNADLPDRDLAVFLSGTPEMGAYRRDLTWAQEYAARNR
AVMLALVMQAVRESFAVEVRFEQPISCHHNYVAEEHLDGLDLLVTRKGAIRAGLGDLGLI
PGSMGTGSYVVRGLGSQRSFYSASHGAGRRMSRNEAKRRYTVDDLVAQTAGVESRKDAGV
IDEIPAAYKDIDSVIAAQSDLVEVVAHLKQVICVKG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
gtggagcttccgatcgagctgagtggggccaagagctccactctcatgtgggctcaggag
tacgacgtcgacgcgaaggcgctgcagcagctccggaacattgcggcactgccgtgggtt
cacggggttcgcgtgatgccggacgtgcacctcggcaagggcgcgaccgtcgggtccgtg
atcgcgatgtaccaggccgtgtcgccggctgccgtcggcgtcgacatcgggtgcgggatg
gaaggggtcctgacctcgctgacggctgcggatctgccggacgacctgtcgcgcattcgt
tcgcggatcgaggccgccgtaccggttgggttccgttcgcacggggacccggtcggcgta
cgtcggctcgggctggacccgcggccgtgggaccggctgtggggcgcgttcacgagtctg
cacgacggggtgcaggaccgcgagcgcaaggccaagcagcagatgggatcacttggctcc
ggcaaccatttcatcgaggtctgcctcgacgacgaggaccgcgtgtggctgatgctgcac
tccggcagccgcaacatcggcaaggagctcgccgagcggcacatgcggatcgcgcgggag
ttgccgcacaacgcggaccttccggaccgtgaccttgcggtgttcctgtccggtacgccg
gagatgggcgcgtaccgccgggacctcacctgggcccaggagtacgccgcgcggaaccgt
gcggtgatgctcgcactcgtgatgcaggcggtgcgggagtcgttcgcggtcgaggtgcgg
ttcgaacagccgatctcgtgccaccacaactacgtggccgaggagcacctcgacgggctc
gacctgctcgtcacccgcaagggcgcgatccgggcgggcctcggggacctcgggctgatc
ccgggatcgatgggcaccggttcgtacgtcgtacgcgggctcggctcgcagcgctcgttc
tactcggcctcacacggggcaggccgccggatgagccgcaacgaggcgaagcgccgttac
acggtcgacgacctggtcgcgcagaccgcgggcgtcgagtcccgcaaggacgccggggtg
atcgacgagatccccgccgcctacaaggacatcgactccgtcatcgccgcccagtccgac
ctggtcgaggtcgtcgcccacctcaagcaggtcatctgcgtcaagggctga
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