Kribbella soli: OG809_25330
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Entry
OG809_25330 CDS
T09724
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ksl
Kribbella soli
Pathway
ksl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ksl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OG809_25330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksl03400
]
OG809_25330
Enzymes [BR:
ksl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
OG809_25330
DNA repair and recombination proteins [BR:
ksl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
OG809_25330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF3218
Motif
Other DBs
NCBI-ProteinID:
WUJ68422
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All DBs
Position
5096429..5097298
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AA seq
289 aa
AA seq
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MRVATWNVNSVKQRMPRLLDWLDERQPDVVCLQETKLADDAFNALLGAELTDRGYEIGLY
GEPQWNGVALLSKVGLEDVVTGVAGAPGFPNPEARAVAATCGGIRIHSLYVPNGRVPDSD
HYHYKLAWLAALTEVIANGPADQIVCGDMNIAPTDADVFDPAAYVGQTHVTPPERQALAE
LMAAKDLHDVVRDRWPSDRIFSYWDYRAGMFHQDLGMRIDLMLATDPVAERVKAAWIDRK
ARKGTGPSDHAPVIIDLDTAPDGDIGPVVPPPSAPRTGRKKTTKLPQSR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtggcgacgtggaatgtgaactcggtcaagcagcggatgccgcggttgctcgac
tggctcgacgagcggcagccggacgtcgtgtgcctgcaggagaccaagctcgcggacgat
gccttcaacgccctgctcggcgccgagctgaccgaccgcggctacgagatcggtctgtac
ggcgaaccgcagtggaacggcgtcgcgctcctgtcgaaggtggggctcgaggacgtcgtc
acgggtgtcgccggcgcgcccggcttcccgaatcctgaggcgcgggccgttgccgcaacc
tgtggcggcatccggatccactcgctgtacgtgccgaacgggcgcgtcccggactccgat
cactaccactacaagctggcctggctcgctgccctgaccgaggtcatcgcgaacggtccg
gccgaccagatcgtctgcggtgacatgaacatcgcgccgacagacgccgacgttttcgac
ccggcggcgtacgtcggtcagacgcatgtgactccacccgagcggcaggcgctcgcggag
ctgatggccgcgaaggacctgcacgacgtcgtccgcgaccgctggccgagcgaccgcatc
ttcagctactgggactaccgcgccggcatgttccaccaggacctcggcatgcggatcgac
ctgatgctcgcgaccgatccggtggcggagcgggtcaaggccgcgtggatcgatcgcaag
gctcgcaagggcaccgggccgagcgaccatgccccggtgatcatcgatctcgacaccgcg
ccggacggcgatatcggtccggtcgtgccaccgccgtccgcgccgcggaccggccggaag
aagacgaccaagcttccccagagccgctga
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