Kribbella soli: OG809_26920
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Entry
OG809_26920 CDS
T09724
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ksl
Kribbella soli
Pathway
ksl03030
DNA replication
ksl03430
Mismatch repair
ksl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ksl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OG809_26920
03430 Mismatch repair
OG809_26920
03440 Homologous recombination
OG809_26920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ksl03032
]
OG809_26920
03400 DNA repair and recombination proteins [BR:
ksl03400
]
OG809_26920
Enzymes [BR:
ksl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OG809_26920
DNA replication proteins [BR:
ksl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OG809_26920
DNA repair and recombination proteins [BR:
ksl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OG809_26920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
UVR
Motif
Other DBs
NCBI-ProteinID:
WUJ68731
LinkDB
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Position
complement(5453881..5455674)
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AA seq
597 aa
AA seq
DB search
MTSPGRAQAADPAMPIRGVQHSFDDLGTPLHAITFCVVDLETTGNPPGEGGITEIGAVKV
RAGEVVGEFQTLVNPSETIPPFIAVLTGITNSMVATSPRIESVLPAFLEFAHGCVMVAHN
APFDMGFLKHESLVHGYDWPDFAVVDTALLARRVITPDEAPNCKLGTLAKLFRTTVTPNH
RALSDARATVDVLHGLFERVGSLGVQTLEDLQTYSSRVAPAVRAKRHLAESLPHAPGVYL
FTDDRGEVLYVGKSKDLRTRVRSYFTASETRNRIGEMVGIATGVRGIECGTPLEAEVREL
RLIGEHKPRYNRRSKFPERQHWLKVTVEPFPRLSLVKQVRDDDAGYLGPFSSRKTAERAM
AALHEAFPIRQCTARMSKHPSLSPCVLAEMGRCVAPCDGRISMDSYGEFVAALRTALTVD
PTPVVDALDRRIDVLSADERFEDAAVHRDRLSAFVRSSARMQRMASVTGCAEICAARRTE
DGGWELHVIRRGRLAAAGFTPRGTDPRPHLEMLRASAETVLPGIGPVAAASPEEIELILR
WLELPGVRLVEMDGTWTCPVSGAGRHLTRLDNSHSDAHHHPTERRRHLRPLGPARVG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcccagggcgtgcacaggccgcggatccagcgatgccgatccgcggtgtgcag
cacagcttcgacgacctgggtacgccgctgcacgccatcacgttctgcgtcgtcgacctc
gagacgacgggcaatccacccggcgagggcggcatcaccgagatcggcgcggtgaaggtg
cgggccggtgaggtggtcggcgagttccagacgttggtcaacccatcggagacgatcccg
ccgttcatcgccgtactgaccggcatcacgaactcgatggttgccacgtcaccgcggatc
gagtcggtgctgccggcgttcctcgagttcgcgcacgggtgcgtgatggtcgcgcacaac
gcgccgttcgacatgggcttcctgaaacacgagagcctcgtgcacgggtacgactggccc
gacttcgccgtcgtcgacaccgcgctgctggcgcggcgagtcatcaccccggacgaggcg
ccgaactgcaagctcgggacgctggccaaactgttccgcaccacggtcacgccgaaccac
cgggcactgtccgacgcgcgggcgaccgtcgacgtgctgcacggactgttcgagcgggtc
gggtcgttgggcgtgcaaacgttggaggacctgcagacgtactcgtcgcgggtcgcgccg
gcggtgcgggccaagcgccacctggccgagtcgttgccgcacgcaccgggtgtgtacctg
ttcaccgacgaccgcggcgaggtgctgtatgtcgggaagtcgaaggacctgcgcacccgt
gtccggtcgtacttcaccgcctcggagacccgcaaccggatcggcgagatggtcggcatc
gcgaccggcgtccgcggcatcgagtgcggtacgccgctggaggccgaagtacgtgagctg
cggctgatcggcgagcacaagccgcggtacaaccggcggtcgaagtttcccgagcggcaa
cattggctgaaggtcacggtcgagccgtttccgcgcttgtcgctggtcaaacaggtgcgt
gacgacgacgccgggtacctcgggccgttcagttcgcggaagacggccgagcgggcgatg
gccgcgctgcacgaggcgttcccgatccggcagtgcaccgcgcggatgtcgaagcacccg
tcgttgtcgccgtgtgtgctggcggagatgggtcgctgcgtggcgccgtgcgacgggcgg
atctcaatggattcgtacggcgagttcgtggcggcgctgcggactgcgctgaccgtggat
ccgacgcccgtggtcgacgcgctggaccggcggatcgacgtgttgtcggcggacgagcgg
ttcgaggatgccgccgtacatcgggatcggttgagcgcgttcgtgcggagctcggcgcgg
atgcagcggatggcgtctgtgaccggatgcgcggagatctgtgcggcccggcggaccgag
gacggcggctgggagctgcatgtcatcaggcgcggtcggctcgctgcggccgggttcacg
ccacgcggcacggacccgcgcccgcatctcgagatgctgagggcttccgccgagaccgtg
ctgccggggatcggcccggtggcggccgcgtcgccggaggagatcgagctgatcctgcgc
tggctcgagctccccggtgtccgcctggtcgagatggacggcacctggacctgcccggtc
agcggcgccggccgtcacctcacccgcctcgacaactcccactccgacgcgcaccaccac
cccaccgaacgccgccgccacctccgcccgctgggtccggctcgggttggttag
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