Kribbella soli: OG809_27560
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Entry
OG809_27560 CDS
T09724
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ksl
Kribbella soli
Pathway
ksl03030
DNA replication
ksl03430
Mismatch repair
ksl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ksl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OG809_27560 (dnaE)
03430 Mismatch repair
OG809_27560 (dnaE)
03440 Homologous recombination
OG809_27560 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ksl03032
]
OG809_27560 (dnaE)
03400 DNA repair and recombination proteins [BR:
ksl03400
]
OG809_27560 (dnaE)
Enzymes [BR:
ksl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OG809_27560 (dnaE)
DNA replication proteins [BR:
ksl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OG809_27560 (dnaE)
DNA repair and recombination proteins [BR:
ksl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OG809_27560 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
DNA_pol_IIIA_C
HHH_3
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WUJ68854
LinkDB
All DBs
Position
5581965..5585513
Genome browser
AA seq
1182 aa
AA seq
DB search
MGSSDSFVHLHVHTEYSMLDGAARIDELFKTAQEMGQPAIATTDHGYVFGAYEFWKTAKK
YDVKPIIGVEAYLTPHTHRSERKRVKWGDANSGRDDVSGSGAYTHMTLLAKNTSGMHNLF
KMSSLASLEGYYFKPRMDRDLLNTYGQGLIATTGCPSGEVQTRLRLGQYKQAVEAAAEFR
DIFGKENFYCELMDHGLGIERDIQKDLLKLAKDLGLPLVATNDLHYTKPEDSTAHAALLC
VQSGSTLSDPNRFKFDANEFYVKTAAEMREVWKDFPEACDNTLLIAEQCEVGFTEGEGRF
MPRFPCPEGHNEESWFVAEVETGLHHRYPEGIPDDVRKRTDYELEVIVSKGYAGYFLVVA
DFINWAKANGIRVGPGRGSGAGSMCAYAMKITDLDPLLHGLFFERFLNPERMSMPDFDID
FDDRRRPEVIRYVTEKYGDDRVAMIVTYGTIKAKQAIKDAGRVLDYPFAMGDRITKAMPP
AVMGKDVPLSGIFDPQHKRYSEAGEFRTLYEGDQDVRKIVDTARGLENLKRQWGVHAAGV
IMSSEPLIELIPIMRRDQDGQVITQFDYPSCETLGLVKMDFLGLRNLTIMDDAVKNIEAA
HGITVDLDKLSKDLDDKPTYDLLARGDTLGVFQFDGGPMRALLRLMKPDNFEDISASTAL
YRPGPMGANSHTNYALRKNGAQEISYPHPELAEPLEPVLGVTYGLIVYQEQVMEIAQRLA
GYSLGKADLLRRAMGKKKREVLDAEYVGFSEGMKANGYSEASIKALWDILLPFSDYAFNK
AHSAAYGLVSYWTAYMKANYPAEYMAAVLTSVKDDKDKMAIYLNECRRMGIKVLPPDVNE
SDSNFTPVGTDIRFGLSAIRNVGVNVVAEIVAAREEKGRFTDFVDFIDKVSLPVCNKRVI
ESLAKAGSFDSMNHARRAVVAVHEQAVDEAIDLKRNEAHGQFDLFSMGDDEADEGEGNSR
LTVTVPEIEEWDKATKLAHERDMLGLYVSDHPLFGVEHVLTNGSDCTIGQLLADEDRPDG
SRVTIGGLVTAVQRKVNKRGDIYAIVTIEDLEGSIEVMMFSSAYQLHAHLLTNDAIILMK
GRVRRREDRLELSGDEVVVPDLTEGPSGPVVITMAANRCTPPVVTQLRDVLKSHPGMTEV
QLKLQARQKTEIWRIADQYRVTPTASLMADLKALLGPSCLAS
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggggtccagcgacagtttcgtgcatcttcatgtgcacaccgagtactcgatgctggac
ggcgccgcgcggatcgacgagttgttcaaaacggcccaggagatggggcagccggcgatc
gcgacgaccgaccacggctacgtgttcggggcctacgagttctggaagacggcgaagaag
tacgacgtcaagccgatcatcggcgtcgaggcgtacctgacgccgcacacccaccgctcg
gagcgcaagcgggtcaagtggggcgacgcgaactccggccgtgacgacgtctccggctct
ggtgcgtacacgcacatgacactgctggcgaagaacacctccggcatgcacaacctgttc
aagatgagctcgctggccagcctcgagggctactacttcaagccccggatggaccgcgac
ctgctgaacacctacggccagggactgatcgcgaccaccggctgcccgtccggcgaggtg
cagacccggcttcgcctcgggcagtacaagcaggccgtcgaggccgccgcggagttccgc
gacatcttcggcaaggagaacttctactgcgagctgatggaccacggcctcggcatcgag
cgggacatccagaaggacctgctgaagctggccaaggatctcggactcccgctggtcgcg
accaacgacctgcactacaccaagcccgaggactcgaccgcccacgccgcgctgctgtgc
gtccagtccggctcgacgctgtccgacccgaaccggttcaagttcgacgcgaacgagttc
tacgtcaagacggccgccgagatgcgcgaggtctggaaggacttcccggaggcctgtgac
aacacgctgctgatcgccgagcagtgcgaggtcggcttcaccgagggcgagggccggttc
atgccgcgcttcccctgcccggagggtcacaacgaggagtcctggttcgtcgccgaggtc
gagaccggtctgcaccaccgctatcccgagggcatcccggacgacgtccgcaagcgcacc
gactacgagctcgaggtcatcgtctcgaaggggtacgccggctacttcctcgtcgtcgcc
gacttcatcaactgggcgaaggccaacggcatccgggtcggcccgggtcgtggctccggc
gccggttcgatgtgcgcgtacgcgatgaagatcaccgacctggacccgctgctgcacggt
ctgttcttcgagcggttcctgaacccggaacgtatgtcgatgcccgacttcgacatcgac
ttcgacgaccgtcgccgccccgaggtgatccgctacgtcaccgagaagtacggcgacgac
cgggtcgcgatgatcgtcacctacggaaccatcaaggccaagcaggcgatcaaggacgcc
ggccgggtgctggactacccgttcgcgatgggcgaccggatcaccaaggcgatgccgccg
gcggtgatgggcaaggacgtgccgctgtccggcatcttcgacccgcagcacaagcggtac
tccgaggccggcgagttccgcacgctgtacgaaggcgaccaggacgtccgcaagatcgtc
gacaccgcccgcggcctggagaacctgaagcgccagtggggtgtgcacgcggccggcgtg
atcatgtccagcgagccgctgatcgagctgatcccgatcatgcgccgcgaccaggacggt
caggtcatcacgcagttcgactacccgagctgtgagacgctcggcctggtcaagatggac
ttcctcggcctgcgcaacctgacgatcatggacgacgcggtcaagaacatcgaggccgcg
cacggcatcacggtcgacctcgacaagctgagcaaggacctcgacgacaaaccgacgtac
gacctgctcgcccgcggtgacacgctcggcgtcttccagttcgacggcgggccgatgcgg
gcgctgctgcggctgatgaagccggacaacttcgaggacatctccgcgagtaccgcgctg
taccggccgggcccgatgggcgcgaacagccacaccaactacgcgctgcgcaagaacggc
gcgcaggagatcagttacccgcaccccgagctcgccgagccgctcgagccggtgctgggt
gtcacctacggcctgatcgtgtatcaggagcaggtgatggagatcgcccagcgcctggcc
ggctactcgctcggcaaggcggacctgctccgccgcgcgatgggcaagaagaagcgcgag
gtcctcgacgccgagtacgtcggcttctcggagggcatgaaggcgaacgggtactccgag
gcgtcgatcaaggcgctgtgggacatcctgctgccgttctccgactacgcgttcaacaag
gcgcactccgcggcgtacggcctggtctcgtactggaccgcctacatgaaggcgaactac
ccggcggagtacatggccgctgttctgacgtccgtgaaggacgacaaggacaagatggcc
atctacctgaacgagtgccgccggatgggcatcaaggtgctgccgccggacgtcaacgag
tccgactcgaacttcaccccggtcggcaccgacatccgcttcggcctgtccgcgatccgc
aacgtcggcgtgaacgtggtcgcggagatcgtcgcggcccgcgaggagaaggggcggttc
accgacttcgtcgacttcatcgacaaggtgtcgctgccggtctgcaacaagcgcgtgatc
gagtcgctggccaaggcaggttcgttcgactcgatgaaccacgcgcgccgggccgtcgtc
gcggtgcacgagcaggccgtcgacgaagccatcgacctcaagcgcaacgaagcacacggc
cagttcgacctgttctcgatgggcgacgacgaggccgacgagggcgagggcaacagccgc
ctgaccgtcaccgtccccgagatcgaggagtgggacaaggcgaccaagctcgcgcacgag
cgcgacatgctggggctgtatgtgtctgaccacccgttgttcggcgtcgagcacgtgctc
accaacggcagcgactgcacgatcggtcagctgctcgccgacgaggaccggccggacggc
agccgggtcacgatcggcggcctggtgaccgcggtccagcggaaggtgaacaagcgcggc
gacatctacgcgatcgtcaccatcgaggacctcgaaggttcgatcgaggtgatgatgttc
tcctcggcgtaccagctgcacgcccacctgctcaccaacgacgcgatcatcctgatgaag
ggccgggtgcgccggcgcgaggaccggctcgagctgagcggtgacgaggtcgtcgttccc
gacctcaccgaaggcccgagcggcccggtcgtgatcacgatggcagcaaaccggtgtacg
ccgccggtcgtcacgcaactgcgggacgtgctgaagtcacatccggggatgaccgaggtg
cagctcaagctgcaggcgcggcagaagaccgagatctggcggatcgcggatcagtaccgg
gtcacgccgacggcctcgctgatggccgacctgaaggcgctcctcggtccgtcctgcctg
gccagctga
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