Kribbella soli: OG809_27605
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Entry
OG809_27605 CDS
T09724
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ksl
Kribbella soli
Pathway
ksl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ksl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OG809_27605 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksl03019
]
OG809_27605 (recQ)
03400 DNA repair and recombination proteins [BR:
ksl03400
]
OG809_27605 (recQ)
Enzymes [BR:
ksl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OG809_27605 (recQ)
Messenger RNA biogenesis [BR:
ksl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OG809_27605 (recQ)
DNA repair and recombination proteins [BR:
ksl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OG809_27605 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
WUJ68863
LinkDB
All DBs
Position
complement(5593264..5595096)
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AA seq
610 aa
AA seq
DB search
MSETTGLPDSEALQVLRRVFGYDAFRGQQAEIIDTVVAGGDALVLMPTGGGKSLCYQIPA
LVRSGVGVVISPLIALMQDQVDALTALGVRAGFLNSTQDFDQRREVEQAFLAGELDLLYL
APERLRVDATVRLLDQGKIALFAIDEAHCVSQWGHDFRPDYLMLSELHERWPDVPRIALT
ATATEATHKEIATRLNLSEAKHFVASFDRPNIQYRIVPKDSPQRQLLDLLRTEHAGDAGI
VYCLSRNSVEKTATFLTQNGIEAVPYHAGLDSRTRAENQSRFLREDGLVVVATIAFGMGI
DKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKMIDTSEGDLA
HRRRLGSHLDAMLALCETVECRRSQLLAYFGQHGETCGNCDTCLTPPESWDGTIAAQKLL
STVYRLQHERGQKFGAGQLVDILLGKETDKVKQFRHQELTVFGIGTELRDTEWRGVVRQL
LALRLLAVEGDYGTLVLTEESGEVLGRRREVMMRREPERVRSSSRSSGGKKAAVDLAPEA
APVFERLRAWRGAVAKEQGVPAYVIFHDATLRQIATDLPSSLAELGRISGVGENKLAKYG
DGVLETLATD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagacaaccggactgcctgattccgaagccctgcaagtgctgcggcgcgtcttc
gggtacgacgcctttcgcggtcagcaggccgagatcatcgacaccgtggtcgcgggcggc
gacgcgctggtgctgatgccgaccggtggcgggaagtcgctgtgctaccagatccccgcg
ctggttcggtccggcgtcggggtggtgatctcgccgctgatcgcgttgatgcaggaccag
gtcgacgcgctcaccgctcttggtgtgcgcgccggattcctcaactccacgcaggacttc
gaccagcggcgcgaggtcgagcaggcgttcctcgccggcgagctcgacctgctgtatctc
gcgcccgagcgcttgcgggtcgacgcgaccgtgcggctgctcgaccagggcaagatcgcg
ttgttcgcgatcgacgaagcgcactgtgtgtcgcagtggggacacgacttccggcccgac
tacctgatgctgtccgagttgcacgagcgctggcccgacgtgccgcggatcgcgttgacc
gcgacggcgaccgaggcgacgcacaaggagatcgcgacccggctcaacctgtccgaggcc
aagcatttcgtcgcgagcttcgaccggccgaacatccagtaccggatcgtcccgaaggac
agtccgcagcggcaactgctcgacctgctgcggaccgagcacgccggagacgcgggcatc
gtgtactgcctgtcccgcaacagcgtcgagaagaccgcgactttcctgacccagaacggg
atcgaggccgtgccgtaccacgccggcctcgacagccggacccgcgcggagaaccagtcg
cggttccttcgtgaggacgggctggtcgtcgttgcgacgatcgcgttcgggatggggatc
gacaagccggacgtccggttcgtcgcgcatctcgacctgccgaagtcggtcgagggctac
taccaggagaccggccgcgccgggcgtgacggtctgccgtcgacggcctggctcgcgtac
ggcctgcaggacgtcgtgcagcagcggaagatgatcgacacgtccgagggcgacctcgcg
catcgacgccggctcggttcgcacctcgacgcgatgctcgcgttgtgcgagaccgtggaa
tgccggcggtcgcagttgcttgcgtacttcggacagcacggcgagacctgcgggaactgc
gacacctgcctgacaccgcccgagtcctgggacgggacgatcgcggcgcagaagctgctg
tcgaccgtgtaccggctgcagcacgaacgcgggcagaagttcggcgccgggcaactggtc
gacatcctgctcggcaaggagaccgacaaggtcaagcagttccggcaccaggagctgacc
gtgttcgggatcggcaccgagttgagggacaccgagtggcgcggggtggtccggcaattg
ctggcgctgcggttgctggccgtcgagggtgactacggcacgctcgtgctgaccgaggag
agcggcgaggtgctcggtcggcggcgtgaggtgatgatgcgtcgcgagcccgagcgggtc
cgctcgtcgtccaggtcgtccggcgggaagaaggcggccgtcgaccttgccccggaggcg
gcgccggtcttcgagcggttgcgcgcctggcgcggcgcggtggcgaaggagcagggcgtt
ccggcgtacgtgatcttccacgacgcgacgctgcggcagatcgcgaccgacctgccgtcg
tcgctggccgagctgggccggatcagcggcgtcggcgagaacaagctggccaagtacggg
gacggcgttctggagacgctcgccacggactga
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