Kribbella soli: OG809_28055
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Entry
OG809_28055 CDS
T09724
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ksl
Kribbella soli
Pathway
ksl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ksl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OG809_28055 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksl03019
]
OG809_28055 (rny)
Messenger RNA biogenesis [BR:
ksl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OG809_28055 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
KH_KhpA-B
PHP
DUF7669
KH_2
FemAB
Motif
Other DBs
NCBI-ProteinID:
WUJ68953
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Position
5691938..5693599
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AA seq
553 aa
AA seq
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MTAMSVGLALIGLLIAGLLAWIGLTLTRRKATDNSTAQLEAAQLTAGAKSAAELIRRQAE
EEAAVLRTRAEAAEQRSEEIRRGAEDRASEVRRDAEQRASDIRREAEAEAQSIRDDLREQ
RLEMERRDHRLTEREERADEQHRAMEERQTELTAQLGELDKRKSEIKDLEDERRRILEGV
ANLTTEQAKAELVAAIEDEAKRHAHTIVRDIERQAQDEGEIKARKIITGAVQRLASEQTS
ESVVSVVHLPSDDMKGRIIGREGRNIRSFEQTTGVNLIIDDTPEAVLLSCFDPVRRETAR
LTLDSLVLDGRIHPSRIEEIYERSKGEVAELCERAAEDAMADVGITDLHPELVRTMGLLR
YRTSYGQNVLKHLIESAHIAGMMAAELGLDPKLCKRGAFLHDIGKALTHESEGSHAIVGA
ELARKYGENDDVVHCIEAHHNEVEVRTVEAVLTQAADAVSGGRPGARRESLEAYVQRLER
LEEIAMHHEGVEKVFAMQAGREIRVMVVPDAVDDIAAQVMARDIAKQVEEELTYPGQIRV
TVVRESRATEVAK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgatgtcggttggcctggccctgatcggattactgatcgcaggattgctggcc
tggatcggcctgaccctcacccgccggaaagccaccgacaactcgaccgcccaactcgag
gctgcgcagctgaccgcgggcgcgaagtccgcggcagagctgatccgacggcaggccgag
gaagaggccgccgtactgcggacccgcgccgaggcagccgagcagcgcagcgaggagatc
cgccgcggcgccgaggaccgtgcgtccgaggtgcgacgtgatgccgagcagcgggcgtcc
gacatacggcgagaggccgaggcggaggcgcagtcgatccgggacgatctgcgggagcag
cgtctcgagatggagcgccgcgaccaccggctgaccgagcgcgaggagcgggccgacgag
cagcaccgcgcgatggaggaacgccagaccgagctgaccgcgcagcttggtgagctggac
aagcgcaagagtgagatcaaggacctcgaggacgaacgccgccggatcctcgaaggcgtc
gcgaatctgaccaccgagcaggcgaaggccgagctcgtcgcggcgatcgaggacgaggcc
aagcggcacgcgcatacgatcgtccgcgacatcgagcggcaggcccaggacgagggcgag
atcaaggcccgcaagatcatcaccggcgcggtgcagcggctggcgtccgagcagacgagc
gagtcggtcgtctccgtcgtccatctgccgagtgacgacatgaagggccggatcatcggg
cgcgagggccgcaacatccggtcgttcgagcagaccaccggcgtgaacctcatcatcgac
gacacccccgaagcggtgctgctgtcctgcttcgatccggtacgccgggagacggcgcgg
ctgaccctggactcgttggtgctcgatggccggatccacccgagccgcatcgaggagatc
tacgagcgcagcaagggcgaggtcgccgagctgtgcgagcgggccgccgaggacgcgatg
gccgacgtcgggatcacggacctccacccggagctcgtacgcacgatggggctgctgcgc
taccgcacgtcgtacggacagaacgtgctcaagcacctgatcgagtcggcgcacatcgcc
gggatgatggcggccgagctcgggctggatcccaagctgtgcaagcgcggtgcgttcctg
cacgacatcggcaaggcactcacgcacgagtccgagggcagtcacgcgatcgtcggcgcc
gagctggcccgcaagtacggcgagaacgacgacgtcgtgcactgcatcgaggcgcaccac
aacgaggtcgaggttcggaccgtcgaggcggtgctgacgcaggccgcggacgcggtgagc
ggcggtcggccgggcgcgcggcgggagtcgctggaggcgtacgtccagcggctcgagcgg
ctcgaggagatcgcgatgcaccacgagggcgtcgagaaggtgttcgcgatgcaggccggc
cgcgagatccgggtgatggtcgtaccggacgcggtcgacgacatcgcggcgcaggtgatg
gcccgcgacatcgcgaagcaagtcgaggaggagctcacgtacccgggccagatccgggtg
accgtcgtacgggagtcccgcgcgaccgaggttgccaagtaa
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