Kwoniella shandongensis: 43585448
Help
Entry
43585448 CDS
T11156
Symbol
CI109_102959
Name
(RefSeq) uncharacterized protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ksn Kwoniella shandongensis
Pathway
ksn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
43585448 (CI109_102959)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ksn03021
]
43585448 (CI109_102959)
Enzymes [BR:
ksn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
43585448 (CI109_102959)
Transcription machinery [BR:
ksn03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
43585448 (CI109_102959)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
43585448
NCBI-ProteinID:
XP_031864235
UniProt:
A0A5M6C842
LinkDB
All DBs
Position
5:join(724189..724373,724441..724600,724666..725024,725079..725964,726016..726237,726293..726537,726591..726643,726698..728431,728496..729328,729402..729530,729604..729825,729921..730145)
Genome browser
AA seq
1750 aa
AA seq
DB search
MDISHSLHTEVTSLSFSFLSSDDVRAISVKKVDNPILLDNLNLPTAGGLYDPKLGPMSAR
DICETCQLSYYACPGHFGHIELPTPVFHPLFMNQCYGLLRSVCLFCHHFKMPELILAQYV
ARLRLLDAGLLSESHFVVNAFNEAMAKAKRHSNDDEEGDIDGEPEASTGAHSVSKETAAE
LIVRVGAYVEAQLAAARKAGNAKDAYKDGLVFEERKRVLNEFGKKNWGKCSRCSAHAYTF
RKEKAVKIIEYDLSAKHKQSNRVNHLRRRDVLATGGKYATKHRRAVDPSEIDEGIEMDSD
KSSADEDNAMEVDESEPEEEEEDEDEGNGLLAVEATVAKTASGQVKGARGRNERVMSPAE
VRAHLRFLFAKEPEICRLIYGRHGQPSAAKTPNAVLPPPVADMFFMDVVPVTPTRFRPAA
KMGDDLFENSQNSLLSAVIQTSQRIQELNQRLINHAKAERGEIVLEGIAKVEGTRTFELL
LEALIKLQNDVNSFMDSTKNPTMMRQGKLPPQGVKQLLEKKEGLFRKHMMGKRVNYAARS
VISPDINIETNEIGIPPVFAKKLTYPEPVTQQNIHEMRQLVINGPKHHPGAALVQNEDGT
QISLDRTTVEQRTAIANQLLTPQGDDHGVGSSTGPPRKNKKVYRHIRDGDIVILNRQPTL
HKPSMMAHRVKVLLGEKTIRMHYANCNSYNADFDGDEMNIHFPQNEVARAEAQMIANTDN
QYLVPTSGNPLRGLIQDHVVAGVWMCNKSSFFTREEYFQLIYGALRTEDNYTGRDRIITL
PPAIFKPRPMWTGKQIFSTIMANLTPTNASGLNLTSRNKVQNKLWARDDSSDPAMSEENV
IFLDGHLICGVLDKSQYGASAYGLVHSVHELYGPYIANRLLGVLSRLLTKYLQHNAFSCR
MDDLILTKEGERLRKEILDKASGDGANAAMKYVGLPEGSKIEDPETAKNLAIRLEEILRD
DHLMAGLDAVMQSAFNKTTSKINNDILPDHLVRPFPDNNMQMMTISGAKGSKVNASQIST
LLGQQALEGRRVPTMVSGKTLPAFKPFDTSARAGGYVANRFLTGIRPQEYYFHCMAGREG
LIDTAVKTSRSGYLQRCLIKHLEGVRVHYDHTVRDSDSSVLQFMYGEDSLDVTKQKHLEH
FDFAARNHVSLLNRVRPRDIDGKVAEDAISHMKKALKKPHKHAPALSEYSPSRYLGSMSE
AYAKKLNNYIDDNKMGFISKKGEHKSSAYASERVVDKEFLHLARARYMRSLVEPGEAVGL
LASQGVGEPSTQMTLNTFHLAGHGAANVTLGIPRLREIVMTASANPTTPTMKLPLRETVS
DPDTETFIKQVSKLTLSQVVERVTVTERLSSKTDDSAGNRQRKYTVLLDLYPPEEYTPEY
EITPEQLHESLAFNFAPRLKKEIQGEIRNVAKSAAQDLQVGKGLKVRVGGDDAADAEVAG
GDEEAGGAIRRRGRDDELDDDDEDSYQLKRTAQARQHEYEEDSNADSGIADLEDFVEKEM
AEDDDDEDEDGEKAKDALEKAKRHQKADDLAELFKLGSKYATTFSFDLHGGRSAQFDLEF
PANAPKLLLVDIVERTCRAAVIHEIDNIGRCMKIFSDKGEFTRTLITEGSNLRGMWALAD
ELVDLDKLASNDIYAILTTYGVEAARRAIIDEVSSVFGAYGIAVDYRHLTIIADYMTHAG
GYRPFNRTGISAKSSPLLKASFETTVAFLSEATLHGDYDDLTSPAAKIVLGKPSGSGTGA
FDIRAPVRIM
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atggatatctcccactccctccacacggaggtcacctccctatccttctccttcttgtca
tcagatgatgttcgtgctatctcggtcaagaaggtcgacaaccctatcttgctcgataac
ttgaatcttcctacagcaggtggtttatatgatcctaaattaggtcctatgagcgctagg
gatatctgtgaaacatgtcaactgtcgtactacgcttgtccgggacactttggacatatc
gaattacccactccagtcttccacccgttgttcatgaaccaatgttatggtctattgaga
tcagtctgcttgttctgtcatcatttcaaaatgcccgaactaatcctcgcacaatatgtc
gctcgactgagactgctcgacgctggtctgctgtcagagtcccacttcgtcgtgaacgct
ttcaacgaagctatggcgaaagcgaagcgtcacagcaacgacgatgaggagggtgatatc
gatggcgaaccagaagctagcacgggcgctcatagcgtgtcgaaagagacagccgcagag
ttgatcgttcgagtcggcgcttatgtcgaggctcagttggccgcggcaaggaaggctgga
aatgcgaaagatgcgtacaaggatggtttggtcttcgaggagaggaagagagtcttgaat
gagttcggaaagaagaactgggggaagtgtagcagatgttctgcccacgcatacaccttc
cgaaaggaaaaggctgtcaaaatcatcgaatacgacctgtcggcaaaacataagcaatct
aaccgagtcaaccacttgagacgtcgggatgttcttgccaccggtggcaagtacgctacc
aagcatcgtcgagctgttgacccttcagagattgacgagggaattgagatggacagtgac
aagagcagcgcagatgaggataacgccatggaggtggacgaatcggagcccgaagaggag
gaggaagacgaagatgagggcaatggattgttagcggtcgaagcgaccgtcgccaagaca
gcaagtggacaagtgaagggtgctcgaggaaggaacgagcgtgtcatgtcacctgccgaa
gtccgagctcatcttcgtttccttttcgccaaggagcccgagatctgtcgtctcatctac
ggacgacacggccaaccctcagcagccaaaacacctaacgccgtcctgcctccccctgtc
gccgacatgttcttcatggacgtcgttcctgtgacacctactcgattccgacctgccgca
aagatgggtgacgaccttttcgagaacagtcaaaactcgcttctttcagctgtgatccaa
acttcccaacgtattcaggaactgaaccaacggttgatcaatcacgccaaagcggagaga
ggagagattgtgctcgagggaattgccaaagtcgagggaacgagaactttcgagctgttg
cttgaggccttgatcaagttgcagaacgatgtcaacagtttcatggatagtacaaagaac
cccacaatgatgcgacagggcaagctacctcctcagggtgtcaagcagttgctagagaag
aaggaaggattattcagaaagcatatgatgggtaaacgtgtcaactacgctgctcgatct
gtcatttcacctgatatcaacatcgagacgaacgagatcggtatccctcccgtcttcgcc
aagaagttgacatatcccgagccagtcactcaacaaaatattcacgagatgaggcagttg
gtaatcaacggacctaagcatcaccctggtgcggctctggtgcagaacgaggatggcacg
caaatatctttggaccgaaccactgtcgaacaacgtacagcgattgccaaccagctcttg
acccctcagggcgatgatcatggggtcggcagtagtactggacctcctaggaaaaataag
aaggtttacagacatatccgtgacggtgatatcgtcatccttaaccgacaacccacactg
cataagcccagtatgatggctcatcgagtgaaggtcttattgggagagaagactatccga
atgcattacgcaaactgtaactcttacaacgctgacttcgacggtgacgagatgaacatc
catttccctcaaaatgaggttgctcgagctgaagcgcaaatgatcgccaacaccgacaac
caatatctcgtcccaacatccggtaacccccttcgaggtcttatccaagatcacgttgtc
gctggtgtttggatgtgcaacaagtcttcattctttactcgagaggaatacttccagctc
atctacggtgccttgagaacggaggacaactacaccggtcgagatcgaattattaccttg
cctcctgctatcttcaagcctcgaccgatgtggaccggaaagcagatcttctcaactatc
atggcgaatttgacaccgacaaatgctagcggtcttaacttgacatccaggaacaaggtc
cagaacaagctttgggcaagggacgactcatcagatcctgcgatgtccgaagaaaacgtt
atcttcctggatggtcatctcatctgcggtgtgcttgacaagtcgcaatacggtgcttcc
gcatacggtctcgtccactctgtccacgagctgtatggcccgtacatcgccaacaggtta
cttggtgttctaagtcgattgttgacgaaataccttcaacataacgccttctcgtgtagg
atggacgatttgatccttaccaaggaaggagaacgacttaggaaggagatcttggacaaa
gcttctggcgacggtgccaacgctgcgatgaagtacgtcggtcttcccgaaggatccaag
atcgaggaccccgaaacggccaagaaccttgcgatccgactggaagagattcttcgtgat
gaccatctcatggctggtcttgatgctgtcatgcagtccgccttcaacaagacgacgtca
aagatcaacaacgacatcttacccgatcaccttgtccgacctttccccgacaacaatatg
caaatgatgactatttctggtgccaagggttccaaggttaacgcttcgcaaatctcgaca
ttgctcggtcaacaagccttggaaggtcgacgtgtgcctaccatggtttcaggaaagacc
ttgcctgctttcaagcctttcgacacgagtgccagagcgggtggttacgttgccaatcga
ttcttgaccggtatccgaccacaggagtactacttccattgtatggccggtagagagggt
ttgatcgacacagcagttaagaccagtcgatctggttatctacaacgttgtctgatcaag
catcttgaaggtgttcgagtacactacgatcacacggtccgagacagtgattcgtccgtc
ctgcagttcatgtacggagaagattcgctcgacgtgacgaaacaaaagcatctcgaacac
ttcgatttcgctgctcgaaatcacgtttcattgctcaaccgagtccgaccacgagacatc
gacggcaaggtggcggaagacgctatctctcatatgaagaaggcgttgaagaaacctcac
aagcatgccccagctctctcagagtactctccttcaagatacctcggcagtatgtcagaa
gcttacgccaagaagctgaacaactacatcgatgacaacaagatgggtttcatcagcaag
aagggagagcacaagagtagtgcgtatgcgagtgaaagagtggtggacaaggagttcttg
catctcgctcgagcgagatatatgagaagtctggttgagcctggagaggcggtgggattg
ttggcgagtcaaggtgtgggagagccgtcgacacagatgacattgaacactttccatttg
gctggtcacggcgctgcaaacgtcacccttggtatccctcgtctgcgagaaatcgtcatg
acagcttctgccaaccctaccactccgaccatgaaacttcccctgcgagaaaccgtttct
gatcccgacaccgagactttcatcaaacaagtgtccaagcttaccctttcccaagtcgtc
gagcgagtcaccgtcaccgagagactgtcctccaagaccgatgattcggcaggtaaccga
caaagaaagtacactgtgctattggacctctacccgcccgaagagtacacaccagaatac
gagatcacgcctgagcaacttcacgagagtttggcgttcaactttgctcctcgattgaag
aaagagattcaaggcgagatccgaaacgttgcgaagagtgctgctcaagacctccaagtc
ggaaagggactcaaggtccgagtcggtggggatgatgctgccgatgccgaggttgctgga
ggtgatgaagaggctggtggtgccattagaagacgagggagagacgacgaactggacgat
gacgacgaggattcatatcaactcaaacgtaccgctcaagcgagacaacacgagtacgag
gaagactccaacgccgattctggtattgccgatctggaagacttcgtcgagaaggagatg
gcagaggatgacgatgacgaggatgaggatggcgagaaggcgaaagacgcgttggaaaag
gcaaagagacaccagaaggcagatgatctggccgagctgttcaagttgggaagcaagtat
gcgaccactttcagctttgacttgcacggtggtagatcagcacaattcgacttggagttc
cccgccaatgccccgaaattgctcttggtcgacattgtcgagcgaacttgtcgagctgcg
gtcatccatgaaatcgataacatcggaagatgtatgaagatcttctccgacaagggagag
tttactcgaacactgatcactgaaggatctaaccttcgaggcatgtgggcactcgctgac
gagcttgtcgaccttgacaaactcgcttcgaacgatatctatgccatcctcacaacatac
ggtgtggaagctgccagacgggcgatcatcgatgaagtgtcaagtgtgttcggagcatat
ggtatcgcagttgattacagacatctgacaatcatcgcggattacatgacccacgcaggt
ggatacagaccattcaaccgtaccggtatttctgccaaatcttctcccttgctcaaggcg
tcattcgaaacgaccgtcgccttcttgtccgaagctacccttcatggtgattacgacgat
ctcaccagtcctgcggcgaagatcgtccttggtaaacctagtggaagcggaacgggtgcg
ttcgatatcagagcacctgttaggatcatgtag
DBGET
integrated database retrieval system
