Kwoniella shandongensis: 43585462
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Entry
43585462 CDS
T11156
Symbol
CI109_102973
Name
(RefSeq) uncharacterized protein
KO
K15541
protein MPE1
Organism
ksn Kwoniella shandongensis
Pathway
ksn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
43585462 (CI109_102973)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksn03019
]
43585462 (CI109_102973)
Messenger RNA biogenesis [BR:
ksn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
43585462 (CI109_102973)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4_3
zf-C3HC4_2
zf-CCHC
zf-RING_2
zf-C3HC4
U-box
zf-RING_UBOX
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
43585462
NCBI-ProteinID:
XP_031864248
UniProt:
A0A5M6C9Q9
LinkDB
All DBs
Position
5:complement(join(765279..765836,765913..766053,766112..766502,766563..766749,766808..766956,767017..767132,767194..767450,767531..767699))
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AA seq
655 aa
AA seq
DB search
MSTVFYRWGAGRDESRVTFDGTHISVFDLKREIILANKMGNGKDFDIAVFDNVTNEEFKD
DDHQIPRSSSLIAKRLPSSIKGRGNAQNYIAGTAAGDALTGDHRIESHARQAMQDKMNRG
SRGVGGTFGSMTKRFDGKDDKKLGEPSIPISTGDAEEDAKIQAILAQGADAWEQMQEDMS
FEQRAPAARTARANKPSSSAVAGAGAKYDFGLESDKEPPVGYICYRCGQKGHWIQNCPNN
DDPAAAERKRFVRVTGIPRSFLQTVETPVGAEGSSGGAMLTADGGFVRAVPDQRQWQKQA
AAKPRALTGADVRDTQPLDAALTCSICKKLVWEAVRAPCCHTAFCEECITTWLVEHDFEC
PSCESKVPSLDKLEADEELREKVKHYVEGEVERSKEEEGAANNAGEGGGEKKEEENGEQS
PDAQSEEGAVPQVKTEEEAKPEPNQILGANGQPINPELLNPQVIQTYLMGAKKMLLNPSL
VPQARAAIVTQMQTLQATLLQMQMMAAMNGMGAGMGGGGGQDFGFQHQQQQQQQQQQQQQ
MMLQQQQQQQMEQEMAMQMQIQMQMQMQMQQNGMGMGMGMPHQQYQQQHQPQQQSFRGGF
RGGFRGGGGGGFRGGRGGFQGGAQRIQPTGGIKRGAEDMGMDGTGGGEVKQQKVM
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacagtcttttaccgatggggtgcgggtcgtgatgagtcccgagtgacttttgac
ggtacccacatctcggtcttcgatctgaaacgtgagatcatcttggcgaacaagatggga
aatggtaaagatttcgatattgcagtctttgacaatgtaaccaatgaagagttcaaagat
gacgaccaccaaataccacgatcctcttccctcatcgccaaacgtttaccctcatctatc
aaaggtcgaggaaacgcccaaaattatatcgccgggacagcagcaggagacgcacttact
ggcgaccacagaatagaatcacatgcgagacaagctatgcaggataagatgaatagagga
tcgagaggcgtaggaggaacatttggaagtatgacaaagcgctttgatgggaaagatgat
aagaagcttggagagcctagtatacctatatcgacaggtgatgcagaggaagatgcgaaa
attcaagccatcttggctcaaggtgcagatgcatgggagcaaatgcaagaggatatgtca
tttgaacaacgagcacccgcagcaagaacagcacgggctaataagccttccagctcggcg
gtcgcaggagcaggtgcaaagtacgactttggcttagagtcggacaaagagccacctgtc
ggttatatctgttatcgatgtggacagaagggtcactggattcaaaattgtcctaataat
gatgatcctgccgctgcggagcgtaaacgatttgtacgagttaccggtattccgagaagt
ttcttgcagacagtagagactcctgtaggagctgaaggatcgagcggtggtgcgatgttg
acagcggatggaggtttcgtccgtgctgttcctgatcaacgacaatggcaaaaacaggcg
gctgctaaacctcgagctttgacaggggcagatgttcgagatacacaacccctcgatgcg
gccctcacatgttcgatctgcaagaaactcgtttgggaagctgtcagggctccttgttgt
catacggctttctgcgaagagtgcataaccacctggttggttgaacacgatttcgaatgt
cccagttgtgagagtaaagtgccaagtttagacaagttggaagcggatgaggagttgaga
gaaaaagttaagcattacgtggagggagaggtggagagaagcaaagaggaggaaggggct
gcgaataatgcaggagaaggagggggcgagaagaaggaagaagagaatggagagcagtca
cctgatgcgcagagcgaagaaggcgccgttcctcaagtgaagactgaagaggaagcgaaa
cctgagccgaaccaaatattaggggccaatggtcaacctatcaacccggaacttctgaac
ccgcaagtcatccaaacatacctgatgggggcaaagaagatgttactaaacccgtctttg
gtaccacaagcgcgagcagctatcgtcacgcaaatgcagactctccaagcgaccttgctt
caaatgcagatgatggcagcgatgaatgggatgggtgcgggaatgggcggcggtggagga
caagattttggtttccaacaccaacagcaacaacaacaacaacagcagcagcaacaacaa
atgatgttacagcaacaacagcaacagcaaatggagcaagaaatggcgatgcaaatgcag
attcagatgcaaatgcaaatgcaaatgcagcaaaacggaatgggaatgggtatgggtatg
ccacatcagcaataccaacaacaacatcaaccacaacaacaatcgttccgaggtggattc
agaggtggatttagaggtggtggtggtggtgggttcagaggaggaaggggtggattccaa
ggaggtgctcaaagaatacagccgactggcggaatcaagaggggcgcagaagatatgggt
atggatggtacgggtgggggcgaggtaaagcagcagaaagtgatgtag
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