Kwoniella shandongensis: 43585688
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Entry
43585688 CDS
T11156
Symbol
CI109_103196
Name
(RefSeq) uncharacterized protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ksn Kwoniella shandongensis
Pathway
ksn03022
Basal transcription factors
ksn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
43585688 (CI109_103196)
09124 Replication and repair
03420 Nucleotide excision repair
43585688 (CI109_103196)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ksn03021
]
43585688 (CI109_103196)
03400 DNA repair and recombination proteins [BR:
ksn03400
]
43585688 (CI109_103196)
Transcription machinery [BR:
ksn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
43585688 (CI109_103196)
DNA repair and recombination proteins [BR:
ksn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
43585688 (CI109_103196)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
43585688
NCBI-ProteinID:
XP_065823329
UniProt:
A0AAJ8LJ61
LinkDB
All DBs
Position
5:join(1404164..1404318,1404392..1404508,1404610..1404738,1404826..1404925,1405045..1405076,1405140..1405269,1405336..1405404,1405456..1405678,1405748..1406008,1406112..1406293)
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AA seq
465 aa
AA seq
DB search
MVQPSFSHPKKDAPATTSSSPTAALDTFLDNQHQSYFEELYKSEAVCLCILRLLPPVCRQ
IILHYLWAHGTIRTTDVKQFLQKDIQAPLAEVDEVVRPALNRKILHPMVHKKNKMQWPLN
DTFKRGLRNALTGLGTSNSFGVPYDRDPNDEVPTEEELIAYGEDTFELLHDSGLMTDPAD
PSGRSPNLVRLTITSKGFQFLLEDRQTQLWEILMYYLTAKEANSERSAETLSMFFSLGCM
QLGQDYSASQSFPHAQNALNDLAQYGFIYKPSEESDQFFPTHLATALCSGDASATQSQTA
DEKRFLILETNYKIYAYTSNELEIAILNLFVDIRIRYPNLVVGKLDRKNVKAAMEKGISA
YQIIAYLSSHAHPQMYSSPPPLLHPTIVDQLHLWDKERNRLKTEETVMFEFFSKELYDDT
ESEARANAALQLAVPGQKLLFIEPQTKPAITEFVKERQNLLRSGL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaccatccttctcccatcctaagaaggatgcacccgccactacttcgtcctcg
cctaccgctgctctcgataccttcctcgataatcaacaccaatcgtatttcgaagaactg
tacaaatcagaggctgtctgcttatgtattttaagactccttcctcctgtatgtcgacag
attatcctgcattatctatgggcacatggtacaatacgcacgaccgatgtcaagcagttc
ctccaaaaggatatccaagcgcctctagcagaagttgacgaagtagttcgaccggctttg
aatcgaaagatcttacatcctatggtgcacaagaagaacaagatgcaatggcctttgaac
gatactttcaaacgtggtctgcgcaacgctttgactggtttaggaacgtccaactcattt
ggcgtgccgtacgatcgagatccgaatgacgaagtgccgacagaagaggagctgatagca
tatggagaagataccttcgagctgcttcacgatagtggactcatgacggatcccgccgat
ccgtctggacggagtccgaatcttgtacggttgacaatcacctcgaagggtttccaattt
ttgcttgaagatcgacaaacgcaattgtgggagatattgatgtactacctcacagcgaaa
gaggcaaactcggaaagatcagctgagaccttgtcgatgtttttctccttgggctgtatg
caactcggtcaggactactccgcttcgcaatctttcccacatgctcaaaacgcactaaac
gatcttgcgcagtacggattcatctacaaaccatcagaagagagcgatcagttcttcccg
acacatcttgccacggctctttgctcaggagacgcaagtgctacgcagtcccagacagcg
gatgagaaacggttcctcatcctggagacaaattacaagatttacgcgtacacatccaac
gagctcgagattgccatcttgaacctatttgtcgacatccgcatccgatatcccaatctc
gtagttggcaaactcgatcgaaaaaacgtcaaagctgctatggagaaaggcatttcagcc
taccaaatcatcgcctatctatccagtcatgcccatccgcagatgtacagctccccaccg
cctttattacaccctacgatcgtggatcaactgcatctatgggacaaggaaagaaataga
ctgaaaactgaagaaacggtcatgtttgagttcttcagtaaagagttgtacgacgatacg
gaatcagaagcgagagcgaatgcggctttgcaattggctgtaccgggccaaaagctgttg
ttcatcgaaccgcagacgaaacctgccattacggagtttgtgaaagaacgacagaatctg
ttgaggagtggtctgtga
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