Kwoniella shandongensis: 43586000
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Entry
43586000 CDS
T11156
Symbol
CI109_103609
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
ksn Kwoniella shandongensis
Pathway
ksn03030
DNA replication
ksn03410
Base excision repair
ksn03420
Nucleotide excision repair
ksn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
43586000 (CI109_103609)
03410 Base excision repair
43586000 (CI109_103609)
03420 Nucleotide excision repair
43586000 (CI109_103609)
03430 Mismatch repair
43586000 (CI109_103609)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ksn03032
]
43586000 (CI109_103609)
03036 Chromosome and associated proteins [BR:
ksn03036
]
43586000 (CI109_103609)
03400 DNA repair and recombination proteins [BR:
ksn03400
]
43586000 (CI109_103609)
DNA replication proteins [BR:
ksn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
43586000 (CI109_103609)
DNA Replication Termination Factors
ELG1-RFC complex
43586000 (CI109_103609)
Chromosome and associated proteins [BR:
ksn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
43586000 (CI109_103609)
DNA repair and recombination proteins [BR:
ksn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
43586000 (CI109_103609)
Check point factors
HRAD17(Rad24)-RFC complex
43586000 (CI109_103609)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
AAA_16
RCF1-5-like_lid
nSTAND3
AAA_3
Viral_helicase1
RuvB_N
Mg_chelatase
Gp44_lid
DNAX_ATPase_lid
AAA_24
NTPase_1
Rad17
MeaB
AAA_assoc_2
FtsK_SpoIIIE
AAA_19
AAA_5
RNA_helicase
AAA_18
SRP54
KTI12
NB-ARC
Motif
Other DBs
NCBI-GeneID:
43586000
NCBI-ProteinID:
XP_031864055
UniProt:
A0AAJ8MXW8
LinkDB
All DBs
Position
6:join(790958..790998,791050..791139,791344..791455,791753..791859,791968..792069,792276..792471,792538..792864,793013..793129)
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AA seq
363 aa
AA seq
DB search
MFEIEIPLIYIFISKRDTMASSSKGDVVPVTAKFVDAEGYEMPWVEKYRPVLLDDIVGNS
ETVERLKVIAEDGNVPHIIISGMPGIGKTTSIHCLAHALLGDAYKEGVLELNASDERGID
VVRNKIKSFAQRKVTLPPGRHKIIILDEADSMTAGAQQALRRTMEIYSNTTRFALACNMS
NKIIEPIQSRCAILRYSKLRDAEVLKRLKEICEMEQVKYNDQGLAALIFTAEGDMRQAIN
NLQSTHSGFGFISQDNVFKICDQPHPIVIRQMIKDCQSGNVDDALARINGLWEQGYSAVD
IVVTVFRVVKGMEELAEYLKLEFIREIGWTHMRILEGVGTLVQLGAMIARLCRLSLPPGT
LKI
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagatcgaaataccattgatttacatcttcatttcgaaaagggacacgatggca
tcgtcttcaaagggtgatgttgtacctgtgactgccaaattcgtcgatgcggaggggtac
gagatgccatgggtggagaaatatcgacctgtgttgttggacgatatcgttgggaattca
gagacagtggagagattgaaggtcattgcggaggatggaaacgtgcctcatatcataata
tcaggtatgccaggtatcggtaaaaccacctcaatccactgtctcgcccacgctctcctc
ggcgacgcatacaaagaaggtgtactcgagctcaacgcttcggatgaacgtggtatcgac
gtggttaggaacaaaatcaagagtttcgctcagagaaaggtgacgctgccccctgggaga
cataagatcatcatattggacgaggcggattcgatgacagcaggagcccaacaagccctc
cgaagaacgatggagatatactccaacactacccgattcgctctcgcgtgcaacatgtcc
aacaagatcattgaacctatacaatcgcgatgtgcgattttgagatatagcaagttgaga
gatgcagaggtgttgaagcgattgaaagagatttgtgagatggagcaggtcaaatacaac
gaccaaggacttgccgctctcatcttcacagccgaaggggacatgcgacaagctatcaac
aaccttcaatccactcactcaggtttcggattcatctcacaagacaacgtcttcaaaatc
tgcgatcaaccgcaccctatagtcattcgacagatgataaaagattgtcagagtgggaac
gtcgatgatgccctggctaggatcaatgggttgtgggaacaagggtatagcgcggtggat
atcgtcgtcacggttttcagggtggtgaaggggatggaagaattggcagagtacttgaaa
ttggagtttataagggagattggctggacacatatgcgtattctcgaaggcgtcggaacg
ctcgtccagcttggtgctatgatcgctcgtctgtgtagattgagtctgccacctggaaca
ctcaaaatataa
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integrated database retrieval system
