Kwoniella shandongensis: 43586537
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Entry
43586537 CDS
T11156
Symbol
CI109_101639
Name
(RefSeq) uncharacterized protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ksn Kwoniella shandongensis
Pathway
ksn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
43586537 (CI109_101639)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksn03019
]
43586537 (CI109_101639)
03009 Ribosome biogenesis [BR:
ksn03009
]
43586537 (CI109_101639)
Messenger RNA biogenesis [BR:
ksn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
43586537 (CI109_101639)
Ribosome biogenesis [BR:
ksn03009
]
Eukaryotic type
Pre-60S particles
RNases
43586537 (CI109_101639)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
43586537
NCBI-ProteinID:
XP_031863361
UniProt:
A0A5M6C5Z3
LinkDB
All DBs
Position
3:join(761470..761514,761591..761730,761948..762121,762317..762372,762459..762549,762668..762800)
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AA seq
212 aa
AA seq
DB search
MSRDPLTYDDGPLVWVDCEMTGLDFLNDRIIEIAVIITDGKLNPVDEGISYIINTPKEVL
DSMNEWCVDQHGRSGLTAACLASPHSYEEVTQKVVEYLQKWIPEKGAGLLAGSSVHADMR
FLLIGMPEVMKHLSYRIVDVSSVKEICKRWYPSVRALHKESRTGDIAHRALDDIKASISE
LEFYRENIFIPVEPSSAASEESNVPVERKTAL
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcgacccactgacatacgatgatggacccctcgtctgggtggactgcgagatg
accggtcttgattttttgaatgatcgaattatcgagattgcagttataataaccgatggg
aagctgaatcctgtcgatgaggggataagttatataattaacaccccgaaagaggttctg
gatagcatgaacgaatggtgtgttgatcaacacggtcgatccggtctcacagcagcatgt
ctcgcctcgcctcactcttacgaagaagtgacgcagaaagtagtagagtatcttcagaag
tggataccggagaagggggcggggttgttggcgggtagttcggtacatgctgatatgcga
ttcctcctcatcggtatgcctgaagtcatgaaacatctatcataccgaatcgtcgatgtc
agctccgtcaaggagatctgcaagcgatggtatccatccgtgcgagcattacataaagaa
agtaggacaggcgatatcgcgcatcgagcgttggacgatatcaaagcgagcattagcgaa
cttgagttttaccgcgagaacatcttcatccctgtggaaccatcatctgccgcatcagag
gagtccaacgtccccgttgaacgaaagactgctttatag
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