| Entry |
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| Symbol |
CI109_101513
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| Name |
(RefSeq) uncharacterized protein
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| KO |
| K03141 | transcription initiation factor TFIIH subunit 1 |
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| Organism |
ksn Kwoniella shandongensis
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ksn00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
43586656 (CI109_101513)
09124 Replication and repair
03420 Nucleotide excision repair
43586656 (CI109_101513)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ksn03021]
43586656 (CI109_101513)
03400 DNA repair and recombination proteins [BR:ksn03400]
43586656 (CI109_101513)
Transcription machinery [BR:ksn03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
43586656 (CI109_101513)
DNA repair and recombination proteins [BR:ksn03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
43586656 (CI109_101513)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3:join(427020..427170,427260..427735,427794..428033,428105..428249,428321..428406,428469..428569,428633..428684,428738..428893,428957..429185,429242..429489,429563..429637)
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| AA seq |
652 aa
MAGEPSDVRRFDASFKKVPGTLSVTPTHIAWVPTERDAMDRQNQAMSRAINMLASKAGSA
KVSLVIKFKDDIPAGGLHFQFTNPTTKDDDRKTVQDILIPFVSANKLGAPAASTPATPAD
IPAPTPSTSAAAAVMSANAKGKRKAEDASPGTNPGVGSPSVPPAVRASRKRTNLLRTKVL
EKNPTLMMLHRELVLGKQITEEEFWYGREALIQAEEMAYAQKPGRPSRLLDDRFDLDAGR
KGKTTGGTGVGIKTADNGPIVLKLSKELTREIFEEFPVVQDAYAKYVPGISETEFWSRYF
TSQLWERHRASVRKSANDEVSRKKDDIFDQYLEEPDWNLQPRQNLPDRDGVERFLDLAAT
EEDHGESITVRDVTMQAGRERSALPLIRRFNDHSKKLLRAADAGRDQSALSDSLYGSGID
IYNEIDYEDLRGPAQPATITLDVQDAGALADSAGDKEGPAGILPGKTDDELVEIAAASAK
TVHNWHPDFSTVCLPNPGAGRPDADGKVEVTPAYKAFVEQRDAQAAAFYVVKDLHRRSNA
ENAVLPAFPDNVYEQMRSCHNAATEFLRQYWSAIMPTQQGALGLAGGASAKEAKAVKMAA
YLKNTKPKVEAIVQTAQILGFDPERVRKAMAPTMGAVNVALEREAKRVGKAT |
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| NT seq |
1959 nt +upstreamnt +downstreamnt
atggcaggcgaaccttctgatgtgcgccggttcgatgccagcttcaaaaaggtgccgggg
accttgtcggtgacgccgacgcatatcgcgtgggtgccaactgaacgcgatgcgatggac
cgacagaaccaagctatgagccgagcaattaatatgctcgcgagcaaagccggctcagcc
aaagtcagtctcgtcatcaagttcaaggatgatattcctgctggcggtcttcatttccaa
ttcaccaaccccactaccaaggatgacgataggaagaccgtgcaagacatcctgattccc
ttcgtgtcggccaacaagctcggcgctcctgctgccagcacacctgctacgcctgcagat
atacctgcacctacacccagcacttccgctgcggcagctgtcatgtctgccaatgcgaag
ggcaaacggaaagcagaggatgcatctccaggtactaatcccggggtcggatcacctagc
gtaccgcccgctgtgagagcgagtaggaaaaggacaaatttgttgaggacaaaggtgttg
gagaagaacccaacattgatgatgttgcacagggagctggtgttagggaagcaaatcaca
gaggaagaattctggtacggaagagaggctctgattcaagcagaagaaatggcatatgca
caaaagcccggacgaccatcacgactgctagatgatagatttgacctggacgcagggaga
aagggcaaaacgacaggaggaacaggtgtcggtatcaagacggcagacaatgggccgata
gttctcaaactgtccaaggagctcacgagggagatctttgaggagtttccagtggttcag
gatgcgtacgccaaatatgtcccaggaataagtgaaacggaattttggtcgcgatatttc
acatcgcaattgtgggaacgacatagagcttctgtccgaaaatcggcgaacgacgaggtg
tcgcggaaaaaggacgatatctttgatcaatacctcgaggagccagattggaacctccag
cctagacagaacctgccggaccgagatggtgttgagaggttcctagatctggcagcgacg
gaggaagatcacggagaatctatcactgtcagagacgtgacgatgcaagctggacgggaa
cgtagcgctttgcctctcatcagacggttcaacgatcactccaagaagctacttcgagct
gccgacgctggacgcgatcagtctgcgttaagcgactccctgtacggctctggcatcgat
atttacaacgagatcgactacgaagatctgcgtgggcctgctcagccagcgaccatcaca
cttgacgtgcaagatgccggagctttagcagactcggcaggcgacaaggagggtcctgcc
ggtatcttgccaggcaagaccgatgatgaactggtggaaatagcagccgcctcggcaaaa
acagttcacaattggcatccagacttttcgacagtctgtctacctaatcccggcgctggt
cgccctgatgcggatggcaaggtagaagtgactcctgcatacaaggcgttcgtagaacaa
agagatgcgcaagcggctgcgttctatgttgttaaagatctacatcgacgatctaacgct
gagaatgctgtacttcctgctttccctgataacgtctacgagcaaatgcgatcatgtcat
aatgctgcgaccgagttcctccgtcaatactggtcagccatcatgcctacgcaacaaggc
gcgttggggttagctggaggagcgagtgcgaaagaagctaaagctgtcaagatggcggcg
tatttgaagaatacaaaaccaaaggtggaagcgatcgtgcagactgctcagattctaggc
tttgatcctgagagggtgagaaaggcgatggctccgacgatgggtgcagtgaatgttgcg
ctggaaagggaagcgaaacgagtcggcaaggcgacgtga |
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