Kwoniella shandongensis: 43586689
Help
Entry
43586689 CDS
T11156
Symbol
CI109_100922
Name
(RefSeq) ATP-dependent RNA helicase FAL1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ksn Kwoniella shandongensis
Pathway
ksn03013
Nucleocytoplasmic transport
ksn03015
mRNA surveillance pathway
ksn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
43586689 (CI109_100922)
09122 Translation
03013 Nucleocytoplasmic transport
43586689 (CI109_100922)
03015 mRNA surveillance pathway
43586689 (CI109_100922)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksn03019
]
43586689 (CI109_100922)
03041 Spliceosome [BR:
ksn03041
]
43586689 (CI109_100922)
03009 Ribosome biogenesis [BR:
ksn03009
]
43586689 (CI109_100922)
03012 Translation factors [BR:
ksn03012
]
43586689 (CI109_100922)
Enzymes [BR:
ksn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
43586689 (CI109_100922)
Messenger RNA biogenesis [BR:
ksn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
43586689 (CI109_100922)
mRNA cycle factors
Stress granule specific factors
43586689 (CI109_100922)
Spliceosome [BR:
ksn03041
]
Complex C
Other components
EJC/TREX
43586689 (CI109_100922)
Ribosome biogenesis [BR:
ksn03009
]
Eukaryotic type
90S particles
Helicases
43586689 (CI109_100922)
Translation factors [BR:
ksn03012
]
Eukaryotic type
Initiation factors
eIF-4
43586689 (CI109_100922)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
43586689
NCBI-ProteinID:
XP_031862914
UniProt:
A0A5M6C4F0
LinkDB
All DBs
Position
2:complement(join(661644..661684,661733..661801,661860..662164,662223..662497,662547..662974,663042..663051,663160..663205,663272..663288))
Genome browser
AA seq
396 aa
AA seq
DB search
MAGINTGDEKLVFESSEAVSVAPTFEALNLKEDLLRGIYAYNFEKPSAIQQRAIIPIMRG
RDVIAQAQSGTGKTATFSISMLQSIDTNLRETQALVLSPTRELAVQIQTVVLALGDYMNV
SCHACIGGTSVGEDIRKLEAGQQVVSGTPGRVFDMIRRRNLRTKDIKMLILDESDELLNK
GFKDQIYDIYRYLPPATQVVVVSATLPHDVLEMTTKFMTDPIRILVKRDELTLEGIKQFF
VAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTEKMREANFTVSSMHGEMVQKE
RDAIMAEFRGGQSRVLITTDVWARGIDVQQVSLVINYDLPSSRENYLHRIGRSGRFGRKG
VAINFVTVEDVRILRDIEQYYSTQIDEMPMNVTELT
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggctggaattaacacaggcgacgagaagctcgttttcgagtcttccgaggctgtctcg
gtggctcctaccttcgaggcactcaacttgaaagaagatcttcttagaggtatctacgca
tacaactttgagaagccctctgctattcaacaacgtgccatcatccctattatgcgagga
cgagatgtgatcgctcaagctcagtctggtaccggtaaaaccgccaccttctccatctca
atgttacagtccatcgacaccaacttgcgagaaacccaggcgttggttctttcccccact
cgagagttggcggtgcagatccagactgtcgtgttggctttgggagactacatgaacgtg
tcttgtcacgcatgtatcggtggaactagcgtcggagaggacatccgaaaactcgaggcc
ggacaacaggtcgtttctggtactcctggtcgagtcttcgatatgatccgtcgacgaaac
ctccgaaccaaggacatcaagatgctcattctcgacgagtccgacgaattgctcaacaag
ggtttcaaggaccagatctacgacatttacagatatctccctcctgccacccaagtcgtc
gtcgtctccgctactctccctcacgatgttctcgagatgacaacaaagttcatgaccgac
cccatcaggatcttggtcaagcgtgatgagttgaccctcgagggtatcaagcaattcttc
gtagccgtcgagaaggaggactggaagtttgacacattgtgtgatttgtatgacaccctt
acaatcacacaagccgtcatcttctgcaacacccgacgcaaggtcgactggttgaccgaa
aagatgcgagaagccaacttcaccgtcagcagcatgcacggagagatggttcaaaaggaa
cgagatgcgatcatggccgagttccgaggtggtcaaagtcgagttttgatcactaccgat
gtctgggcgagaggtatcgacgtccaacaagtctccctggtcatcaactacgatttgccc
tcgtctcgtgagaactacttgcacagaataggtcgaagtggtcgattcggccgaaagggt
gttgcgatcaactttgtcacggttgaggatgtcagaatcctccgagatatcgagcagtat
tactctactcaaatcgacgaaatgcccatgaacgttaccgagctcacatga
DBGET
integrated database retrieval system
