Kwoniella shandongensis: 43587476
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Entry
43587476 CDS
T11156
Symbol
CI109_105455
Name
(RefSeq) uncharacterized protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ksn Kwoniella shandongensis
Pathway
ksn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
43587476 (CI109_105455)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ksn03041
]
43587476 (CI109_105455)
03009 Ribosome biogenesis [BR:
ksn03009
]
43587476 (CI109_105455)
Enzymes [BR:
ksn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
43587476 (CI109_105455)
Spliceosome [BR:
ksn03041
]
Complex A
U2 snRNP components
U2 related factors
43587476 (CI109_105455)
Complex B
43587476 (CI109_105455)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
43587476 (CI109_105455)
Ribosome biogenesis [BR:
ksn03009
]
Eukaryotic type
90S particles
Helicases
43587476 (CI109_105455)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
DEAD
Helicase_C
AAA_22
Cas3-like_C_2
SRP54
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
43587476
NCBI-ProteinID:
XP_031862212
UniProt:
A0A5M6C2M8
LinkDB
All DBs
Position
10:complement(join(122050..122127,122191..122316,122380..122463,122533..122979,123042..123166,123222..123996,124051..124256,124321..124618,124683..124839,124914..124990))
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AA seq
790 aa
AA seq
DB search
MSEPPSKRSKTSPPGTSVPPENNPYLAHRNMSNGASSSSNGYATGANGASGGAVGKVENP
LNGLVPRKVTVDQAKAILDGDINPFKGLAPFSANYRKILEQRKGLPVYQKMQEFLTVFSA
NQITVMEGQTGSGKTTQIPQFVCYSDLPMLRGKMVACTQPRRVAAMSVAKRVADEMDVQL
GKQVGYSIRFEDMTEQGTTFLKYMTDGMLLREAMNDPLLERYSTVILDEAHERTLATDIL
MGLLKDIAKRRPDLKIIVMSATLDVAKFQKYFGEGIATSGIAPVVKVSGRTFPVETFFTQ
EPETDYVEAAIRTVLFIHQAEDEGDVLLFLTGEEEIEDACRKIRAEGEELANKGMAGPIL
VVPLYSSLPPHQQQRIFDPAPPARKDGLPGRKVVVSTNIAETSLTIDGIVYVVDPGFCKQ
KVYNPRIRVESLLVSPISKASAMQRAGRAGRTRPGKCFRLYTERDFVKELEEQTHPEILR
SNLANTVLELIKLGIKDLVHFDYMDAPAPETIMRALELLHYLAALDDEGNLTPLGEIMAE
FPLDPQLAKMLIVSPEFGCSNEILSLTAMLSVPNVFMRPASQRKEADLAKAQFTHPDGDH
LTLLNVYHAYKSNEGDAKTWCWQNYLNQRSLAQADNVRTQLKRAMEKHDLELCSTAWEDR
NYWNNIRQALSCGFFMQVAHKEGEKGGYMTVKDNQVVRLHLSCGLDTTPEWVIYNEFVLT
TANFIRTVTEVRPEWLMEYAPQYFDPTTFPENSETRRALQRVLDKKTGKYGGASGSGVDL
KKKKKKRKAE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagccaccttccaagcgatctaaaacttcacctcctggcacgtccgttcctccc
gagaacaacccatacttggctcaccgaaatatgagcaacggtgcttcctcctcttcgaac
ggatatgcgaccggcgccaatggtgctagcggtggagcggttgggaaggttgagaaccct
ctgaatgggttggtacctcgtaaagttacagttgatcaagccaaagccatcctggacggc
gatatcaaccctttcaaaggtctcgctcctttctcggccaactaccgaaagatcctcgaa
caacgtaaaggtcttccggtctaccagaaaatgcaagaattcctcacagtcttctccgcc
aaccaaatcactgtcatggaaggtcagactggttcaggaaagacaacgcagattcctcag
tttgtgtgttattcggatttgccgatgttgagagggaagatggtggcttgtactcaacct
agaagagtagctgctatgagtgttgcaaagcgtgtagcggatgagatggatgttcaactg
ggcaaacaagttggttactcaatccgattcgaggatatgacagaacaagggacgactttc
ctcaagtacatgacggatggtatgctgttgagagaggccatgaacgatccgttattggaa
cgatattcgaccgtcatcctcgatgaggcgcacgagagaacactagcaactgatattctt
atgggtctgctcaaagatatcgccaaacgtcgacccgatctcaagatcatcgtcatgtcc
gctactctcgatgtcgccaaattccagaaatacttcggagaaggtatcgccacttccggt
atcgctcccgttgtcaaagtgtccggtcgtactttccccgtcgagaccttcttcacgcaa
gaaccggaaaccgactacgttgaagctgccatccgaacggtcttgttcatccaccaagca
gaagatgaaggagatgtgttactgttcttgactggtgaagaggagatcgaagatgcgtgc
aggaagatcagagcggaaggagaagaactggcgaataaggggatggctggaccgatactc
gtcgtacctctctactcttccttgcctcctcatcaacagcaacgtattttcgaccctgca
ccaccagcgcgaaaggacggccttcccggtcgaaaagtcgttgtgtccaccaacattgcc
gaaacatcccttaccatcgacggtatcgtctacgtcgtcgatccaggattctgcaagcag
aaggtgtacaacccccgaatccgagtggagagtctgctcgtctcgcccatctcaaaggca
tcggcgatgcaaagagctggtcgtgctggtcgtacacgacctggaaaatgtttcagactg
tataccgagagggactttgtcaaggagttggaggaacagacacaccctgagatcttgaga
agcaacctggcgaacacagtcttggagttgatcaaattgggtatcaaggatttggtccac
ttcgattatatggatgctcctgcgcccgagactatcatgcgagctttggagttgctgcat
taccttgccgcgttggacgatgagggtaaccttacacctctgggtgagatcatggcagag
ttccccctggatcctcagcttgccaaaatgcttattgtctctcccgagtttggctgttcg
aacgaaatcctctctctcactgctatgctttccgttcccaacgtcttcatgcgacccgct
tcccaacgaaaagaggccgatctcgccaaagcgcaattcacccatcccgacggcgaccat
ctcaccctccttaacgtctaccacgcatacaagtctaacgagggcgatgccaagacatgg
tgttggcagaactatctcaaccaacgttctttggcgcaagctgataatgttaggactcaa
ttgaagagagcgatggagaagcatgatttggagttgtgtagcactgcatgggaagatagg
aactactggaacaatatcagacaggctttgtcatgtggtttcttcatgcaagtcgcgcac
aaggagggagagaagggtggttatatgacagtgaaggacaaccaggttgtccgacttcac
ttgtcatgtggactggacaccaccccagaatgggtcatctacaacgaattcgtactcacc
accgctaacttcataagaaccgtgacggaagttcgacctgaatggttgatggagtacgct
ccacaatatttcgaccccaccacattcccagagaacagcgagaccagaagagctttacaa
cgagtcttggacaagaaaactggtaaatacggtggcgcgtctggatcaggtgtagatttg
aaaaagaagaagaagaagagaaaggcagagtag
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