Kwoniella shandongensis: 43587523
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Entry
43587523 CDS
T11156
Symbol
CI109_105502
Name
(RefSeq) uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ksn Kwoniella shandongensis
Pathway
ksn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
43587523 (CI109_105502)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksn03019
]
43587523 (CI109_105502)
Messenger RNA biogenesis [BR:
ksn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
43587523 (CI109_105502)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
43587523 (CI109_105502)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
PulA_N1
Motif
Other DBs
NCBI-GeneID:
43587523
NCBI-ProteinID:
XP_031862258
UniProt:
A0A5M6C3Q9
LinkDB
All DBs
Position
10:join(243856..243877,244072..244304,244591..244965,245036..245719,245777..246044,246099..246186,246242..246575,246641..246664)
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AA seq
675 aa
AA seq
DB search
MALRKLQAEIDRTLKSVATGVEVFEGTFDKLNHASNATQKDKLENDLKTQIKKLQRMRDQ
IKAWLGNGDIKDKTALLDNRKLIETQMERFKALEKEMKMKAFSKEGLIAQSKLDPAEKAK
RNMIDWIGTTTDELARQTEQTEAELELLTATKKKKQAGDRLGELETLNERRQWHVGRLEV
VQRMLENGQLSVENVEDIQEDVKYFLEANSEEDFDFDNGIYDELNLQEEEDYMPELGHDD
GSQLDTASLADVDTAPTPAPAPKTPAKEEPPKKVTPAAKTTSSTSIHDDTPPSPVAARKT
PSRKATLESKAAEPLTAKTPAKTEPVPPLPTSVSTPTPAPAPATVKPAALPPIRYAAAAA
AAVASTIAAATSSTPSSAPVSTPPAAEATSPQKKDTIPVPETTVETPLSEKAPTPELTSS
PAPESQSPGTAGTPAQTNGHAAPPPPPGLSSARSPQPSTQPSTQLQTPNIPTQHPANNGS
AAPPGYVPQHAESSRAGSFGSAGQQRPQAQPGVMGNLMQSFEVAKEISKRRTDDVNELHA
ALDGSFNNIPQQTDAEPPRYYHPKNPIKTPSYYPQARLPILEDKSIYSRLELDQLFYIFY
YMTGTYEQWLAARELKKQSWRFHKQYLTWFQRAHNPQAITEDYEQGGYYYFDWENSWCQR
RKSDFRFEYRWLSDH
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggccttgaggaaattgcaggccgagatcgaccggaccctcaaatccgtcgctaccggc
gtcgaagtcttcgaagggacattcgacaagctcaaccacgcttccaacgctactcaaaaa
gacaagttggagaatgatctcaagacgcagatcaagaaattgcagaggatgagagatcag
ataaaggcttggttgggtaatggcgatataaaagataagacggcgttgttggataatagg
aagttaatagagacgcaaatggaacggttcaaagcgctagaaaaggagatgaagatgaaa
gccttttccaaagaaggcttaatcgctcaatccaaacttgatccagctgagaaggccaag
cgaaatatgatcgactggatcggcacgaccacggatgaacttgctcgacaaacagaacag
accgaggccgagctggaactcctcacagcgacaaagaagaagaagcaggctggagatagg
ttgggagaactggaaacgctgaatgagaggagacaatggcatgtgggaaggttagaggtg
gttcagagaatgttggagaatggacagttgtcggtggaaaacgtggaggatatccaagag
gatgtcaagtatttcctcgaagccaactcggaggaggacttcgacttcgacaacggaatc
tacgacgagctcaaccttcaagaagaggaggactacatgcccgaactcggacacgatgat
ggatcacagctcgacactgcctctctcgccgacgtcgacactgcacccactcccgctcct
gctccgaaaacaccggcaaaggaagagcctcccaagaaggtcactcctgctgccaagacc
acttcatccacatcgattcacgacgacacaccaccaagtcctgtcgcagcgaggaagaca
ccttctcggaaagctactttggagagcaaggccgccgaaccactgacggcgaagactcct
gcgaagacagagccggtccctccccttccgacttcggtctccactcctactcctgcacca
gcgccagcaacggtcaagccagctgctctgccacccatccgatacgctgctgcggctgct
gccgccgtagcaagtacgatagcggcggcaacctcgtccactccttcgagcgcacccgtt
tcgacacccccggctgccgaagctacctctcctcagaagaaggacaccatacccgttccc
gagaccactgtggagacgcccttgtcggagaaggctcccacacccgagttgacttccagt
ccggctcctgaatcgcaaagtcctggaactgcaggtacaccagctcagaccaatggccat
gctgctcctccaccaccacctggtctttcttctgctcgctctcctcaaccttccactcag
ccgtcaacgcaattgcaaacgccgaatatccccactcaacatcccgcgaacaacggctct
gccgctcctccaggatatgtgcctcaacatgccgagtcttccagagctggctcgtttggt
tcagcgggacaacaacgaccacaggcgcagcctggtgttatgggtaatttgatgcaaagc
ttcgaagtggcgaaggagatatccaaacgaagaacggacgatgtcaacgagctgcacgcg
gcgttggatggaagcttcaacaacattcctcaacaaactgatgcggaaccaccacgatat
taccatccgaagaatcctatcaaaacaccttcctactacccacaagcgcgattacctatt
ctcgaggacaagtcgatctattctcgcttagagctggaccaactgttctacatcttctac
tacatgacggggacgtacgaacaatggctcgctgcgagggagttgaagaaacaaagttgg
agattccataaacaatatctgacttggttccaaagagctcataatccacaagcgataacg
gaggactatgaacagggtggatattattactttgattgggagaacagttggtgtcaaaga
agaaagagcgatttcagatttgagtaccgatggttatcagatcattag
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