KEGG   Kwoniella shandongensis: 43587807
Entry
43587807          CDS       T11156                                 
Symbol
CI109_107225
Name
(RefSeq) pre-mRNA-splicing factor RSE1
  KO
K12830  splicing factor 3B subunit 3
Organism
ksn  Kwoniella shandongensis
Pathway
ksn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ksn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    43587807 (CI109_107225)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ksn03021]
    43587807 (CI109_107225)
   03041 Spliceosome [BR:ksn03041]
    43587807 (CI109_107225)
   03036 Chromosome and associated proteins [BR:ksn03036]
    43587807 (CI109_107225)
Transcription machinery [BR:ksn03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     43587807 (CI109_107225)
Spliceosome [BR:ksn03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    43587807 (CI109_107225)
 Complex B
    43587807 (CI109_107225)
 Complex C
   U2 SnRNP specific factors
    43587807 (CI109_107225)
Chromosome and associated proteins [BR:ksn03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     43587807 (CI109_107225)
    TFTC complex
     43587807 (CI109_107225)
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_EML
Other DBs
NCBI-GeneID: 43587807
NCBI-ProteinID: XP_031862094
UniProt: A0A5M6C218
LinkDB
Position
14:complement(join(366130..366345,366414..366543,366604..366962,367018..367143,367201..367407,367463..367582,367635..367803,367856..368232,368284..368361,368413..368825,368878..369236,369293..369471,369529..369731,369791..369884,369936..370028,370089..370203,370265..370273,370334..370396,370458..370572,370637..370691,370768..370790,370862..371012))
AA seq 1217 aa
MHLLNLTLQPPSNITTAVVGSFSGTKGQEILVIKGGTKLEILKLNTGTGQLDTICSTEAF
GTVRNVAGFRLAGMTKDYILASSDSGRLSIIEFVVTPTPHFESLYQEVYGKSGSRRVVPG
QFLAVDPKGRSALVGALEKTKLVYVLNRNQEGKLFPSSPLEAHKNHTLVTHIVGVDQGYD
NPLYAALEMDYSDADEDPTGEALENTQKYLTFYELDLGLNHVVRKWSEPTDRRANMLVQV
PGGQNANSDKFDGPSGVLVCCEDHIIWKHMDADAHRIPIPRRRNPLVQRGDSSRGLIIVA
AVMHKIRGAFFFLLQSEDGDLYKVWIEHEGEDVKALKIKYFDTVPVANSLCILKSGYLFV
ASEFSDQNLYQFQALGDDDGEQEWSSTDYPENGTIDGPLPYAFFNPRPLQNLLLVDTLSS
LDPITDAQVVNLLGPASDAPQIYAACGRGPRSTFRTLKHGLDVSVLVSSPLPGVPTNVWT
LKLTDEDEFDSYIVLSFPNGTLVLSIGATIEEVNDTGFLSSGPTLAVQQLGDSGLLQVHP
YGLRHIRAADRVDEWPAPPGQTIVAATTNKRQVVIALSTAELVYFELDSEGSLSEYQDKK
ALPGNATCLSIAEVPEGRRRTPYLAVGCDNQTVSVISLEPESTLVTQSLQALTAPPVSIC
LAEIFDVNIDKNRPTMFLNIGLLNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKLVRATVH
GQPSVLAFSSRTWLLYTYQDMLQTQPLIYDTLEYAWTLSASMCPDGLIGISGNTLRIFTI
PKLGEKLKQDLIPLSYTPRKFVSHPYNTVFYMIESDHRTYAPATVNRIVAEKEASGSRLD
KTILELPPNEFGRPRAGAGHWASLIRVIDPVANESLMTLELDEDEAAFSLAICYFERGGG
EPFLVVGTGVKTTLQPKGCQEGWLRVYAIKEQGKVLEFMHKTKTDEIPLCLAAFQGFLLA
GVGKALRLYEMGKKALLRKCENNGFPTAVVTITVQGARIIVGDMQESTFYCVYRSIPSRQ
LLIFADDSQPRWLTCVTNVDYETIACGDKFGNIFLNRLDGRISETVDDDPTGATILHEKS
FLMGAAHKTDLIAHYNVGSIVTSITKVSLVAGGRDVLVYTTISGAVGALIPFVSMDDVEL
MTTLEMHMRSHDVSLVGRDHLAYRGYYVPVKDVVDGDLCESFGLLPYSKQQAIAADLDRN
VGEVLKKLEQMRTSSAF
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgcatctcctcaacctcacgctccaaccgccttcgaacataacgaccgcggtcgtcggt
tctttctcggggacaaaaggacaggagatattggtcatcaagggaggtacaaagttggag
atattgaagttgaacacgggtacaggacaactggacacaatatgttcgaccgaggcattc
ggcacggtcaggaatgtcgctggattcagattagcaggaatgaccaaagattacattctc
gcttcttctgattctggtcggttgtcaataattgagtttgttgtcaccccaacaccacat
ttcgagagtctgtatcaggaagtgtacggaaagtcgggcagtcgtcgagtggtccctggt
cagttcttagcggtagacccgaagggtagaagtgctttggtcggagcgctcgaaaagacg
aagcttgtctacgtccttaacagaaatcaggaaggaaaactcttcccttcttcgccttta
gaagcgcacaagaaccatactcttgtgacacatattgttggcgtggaccagggatacgac
aaccctctttacgcggcgctggagatggactattcagatgcagatgaggatccaactgga
gaggcgttggagaacactcagaaatatttgacattctacgaactggatctcggtttgaac
cacgtcgtgaggaaatggagcgagccgacagataggagagcgaacatgcttgtgcaagtc
cctggtggtcaaaatgccaattcagacaagtttgacggaccctccggtgttttggtctgt
tgtgaggatcatatcatatggaagcatatggatgcggacgcacatagaatacccatcccg
agacggcggaacccgcttgtgcagcgaggagacagcagtcgaggattgatcatcgttgcg
gcggtcatgcacaaaatcagaggcgcattcttcttcctgctccaatctgaggatggagac
ctgtataaggtgtggatagagcacgagggagaggatgtcaaggctttgaagatcaagtac
ttcgacactgttccggtggcgaacagtttgtgtatcctgaagagcggttacctctttgtt
gcgagcgagttcagcgatcaaaacctctaccaattccaagcccttggtgacgacgatggc
gagcaggaatggtcatccactgactaccccgagaacggaaccatcgacggacccttacct
tacgcgttcttcaacccgagaccccttcaaaacctccttctcgtcgatactctttcatct
ctggaccccatcaccgacgcgcaagtcgtcaacctcctcggtccggcttctgatgctccc
caaatctacgcggcttgtggacgaggacctagaagtacattcaggacgcttaagcatgga
ctggatgtatcggtgttggtcagctctcctttgccgggtgtgccaaccaatgtttggaca
ttgaagttgacggatgaagacgagttcgattcatacattgttttgtcattccccaacggt
actcttgtcctatcgatcggcgctaccatcgaggaagtcaacgataccggtttcctatcc
tctggtcctacgcttgcagttcagcaactaggcgattccggtcttctccaggtccacccg
tatggtctcagacatattcgagctgccgaccgagtggacgaatggcccgcccctcctggt
cagactatcgtcgctgccactacgaacaaacgacaagtcgtcattgcgctcagtacagcg
gagttggtgtacttcgagttagattctgaggggtcattgagcgagtaccaggataagaaa
gctttaccagggaatgcgacatgtctgagtattgctgaggtacctgagggccgaagacgg
acaccttacctggcggtcggttgtgacaatcaaacggtctcagtcatctctttggagcct
gagagcactctggttacgcaaagtcttcaggctttgaccgctcctcctgtgtctatctgt
cttgccgagatcttcgacgtcaacatcgacaagaatcgcccgaccatgttccttaacatc
ggtctcttgaacggtgtcttattgcgtactgttgtcgatcctgtagacggctccctatcc
gacactcgattacggttcttgggcgccaagccacctaagcttgttcgtgcgactgttcat
ggtcaaccttccgtcttggccttctccagcagaacatggctattatacacgtaccaagac
atgctccagactcaaccgctgatttatgatacactggagtatgcctggacactgagcgct
agcatgtgtccggacggtttgattggtatctctggaaacactttgaggatattcactatc
cccaagctgggcgagaagcttaagcaagatctcatcccattatcatacactcctagaaaa
ttcgttagccatccatacaacactgtcttctatatgattgagtcagatcacagaacatac
gcgcccgcgacagtcaacaggatagtagcggagaaggaggcgagcggtagtcgacttgac
aagacgatattggaacttcctcccaatgagtttggacgaccgagagcgggtgcgggacat
tgggcgtcactgattcgtgtgatagaccctgtggctaacgagtccctcatgacgcttgag
ctcgacgaggacgaggcggccttctcgctcgccatttgctactttgagcggggcggaggc
gaacctttcctcgttgtcggtaccggtgtgaagactacccttcaaccgaagggatgtcaa
gagggttggttgagagtgtatgctatcaaggagcaagggaaggtcctcgagttcatgcac
aagaccaagacggatgagataccgctttgccttgctgccttccagggcttcctactggct
ggtgtcggcaaagcattgagattgtatgagatgggtaagaaggctttgctgcgaaagtgt
gagaacaacggtttccctaccgcggtcgtgacgatcactgtgcaaggagcacgaattatt
gttggcgacatgcaagagtccacgttctactgtgtttaccgatctatcccatctcgacaa
ctcctcatcttcgccgacgattctcaaccgcgatggctcacgtgcgtcaccaacgtcgat
tacgagactattgcctgtggtgataagttcggtaacatcttcttgaaccgattggatggg
agaatatcggagacagtggacgatgatccgacaggagcgacgatcttacatgaaaagagt
ttcttgatgggggctgctcacaagacggacttgattgcgcactacaatgtgggcagtatc
gtcacgtcaattaccaaagtgtcgctagttgctggtggaagggatgttttagtctacacc
accatttcaggagcggtcggagcgcttattcccttcgtatcgatggatgacgtagaactc
atgacaacgttagaaatgcatatgagatcacacgatgtctctctcgtgggtcgagatcac
ctcgcatacagaggatattacgtgcccgtgaaggatgtggtggatggtgatctgtgtgag
agtttcggactattaccgtactcgaaacaacaagcaattgcggcggacctggatagaaat
gtgggagaggtattgaagaagctagaacagatgagaacgagtagtgcgttctag

DBGET integrated database retrieval system