Kwoniella shandongensis: 43587970
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Entry
43587970 CDS
T11156
Symbol
CI109_106488
Name
(RefSeq) uncharacterized protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ksn Kwoniella shandongensis
Pathway
ksn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
43587970 (CI109_106488)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ksn03041
]
43587970 (CI109_106488)
Spliceosome [BR:
ksn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
43587970 (CI109_106488)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
PRP4
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_Aladin
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WD40_like
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_IFT140_1st
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
43587970
NCBI-ProteinID:
XP_031861841
UniProt:
A0A5M6C1P0
LinkDB
All DBs
Position
12:join(526323..526341,526392..526576,526737..526853,526912..526985,527048..527141,527203..527480,527545..527757,527824..527931,528001..528478)
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AA seq
521 aa
AA seq
DB search
MDLDELAVDNTYQLGGSDDERERAQNAALIEELERKKRLRKMAVPTDDKKVRERLRAYGE
PITLFGEGPGDRRDRLKYVQEQIEQARGSQGMVVDSDSDESSEEEDEGEFYTEGTDSLLE
ARRKLAGYSLAKARSRIARQRVEVGLPLSKIVNLRKELYQNLKTFNNLGSQFGDDRPLST
IRFSPNSKLILTTSWTGDSKLWDLPNLNAVSTKRGHTDKIGGAAWHPQATVGMSEDGLNF
ATGGGEGSVKLWSLSSDKPLATLSGHENRVGRVAFHPSGAYLGSAGFDGTWRLWDAATHQ
ELMVQEGHSKEVYALTFQDDGALAASGGFDAIGRVWDVRTGRTAMVLDGHVKEILAMDFA
PNGYQVATGSGDDTVRIWDLRALKTQYIIPAHKSSVSDVRFFRSTSESPCIPLDDTKSLL
SNGHSAVNGSSETMDVDKSHDADATATASGEMELRRSGLFLVTAGFDCNVRIWSADEWNL
VRNLATDAGKVMSVDVSGDGKFIASASYSRSFHLFGGDNSL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgacgaactcgccgtcgataacacttaccaacttggtggttctgatgatgag
cgagaacgagcccagaatgcagctcttatcgaagagctggagaggaagaagagattgagg
aagatggcggtgcccacggatgacaagaaggtcagggagagattgagagcgtacggagag
cctataacgttgttcggtgaagggcccggagacagaagagatagattaaaatatgttcaa
gaacaaatcgaacaagcgcgaggtagccagggtatggtggtggattcagattcagacgag
agcagcgaggaggaagatgagggagagttctataccgagggaacggattcgttgttagaa
gcgagacggaagttggcaggatactcattagcaaaagcgcgatcccggatagcacgacag
cgagtagaggtgggactaccactaagcaagatcgttaatttgcgaaaagagttgtatcaa
aatctcaaaactttcaacaatctcggttcacaattcggtgatgacagaccattatccacc
attcggttctctcctaactccaaactcattctgacgacatcctggactggcgattcgaaa
ttatgggatttaccgaacctcaatgcggtaagcacgaagagaggacataccgacaagatt
ggaggtgctgcttggcatccacaagctacggtggggatgagcgaagatgggttaaacttt
gccactggaggaggtgaaggcagtgtcaagctgtggtcgttgtcaagcgacaaaccacta
gcgacattgtcgggtcacgagaacagagtaggacgagtcgccttccacccttcaggagca
tatctgggttcagcaggatttgatgggacatggagattatgggatgcggcgacacatcag
gagttgatggtgcaggaaggacatagtaaggaggtgtatgcgttgacgttccaagacgat
ggagcattggcggcgtccggcggtttcgacgcgattggacgagtatgggatgtgagaacg
ggtcgaaccgcgatggtcttagatggacacgtgaaggagattctcgcgatggactttgcg
ccaaatgggtaccaagttgccactggatccggtgacgatactgttcgaatatgggatcta
cgagccttgaaaacgcaatatatcattcctgcccacaaatcatccgtgtcagacgtccga
ttcttccgctccacttccgaatcaccatgtataccactggacgatacgaaatcactctta
tcgaatggtcattcggcagtcaacggttcttccgagactatggacgtggacaaatcgcac
gacgccgatgcaactgcgactgcatcgggagagatggaactgcgtcgatcaggattattc
ctcgtcacggcaggattcgattgtaatgtcagaatatggagtgcggacgaatggaacctg
gtcagaaatttggcgacggacgcagggaaagtcatgtcggttgacgtttcgggtgatggg
aagtttatagcgagcgcaagttatagtagatcgttccatcttttcggaggggacaactct
ctgtag
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integrated database retrieval system
