KEGG   Kwoniella shandongensis: 43587977
Entry
43587977          CDS       T11156                                 
Symbol
CI109_106495
Name
(RefSeq) uncharacterized protein
  KO
K14855  ribosome assembly protein 4
Organism
ksn  Kwoniella shandongensis
Brite
KEGG Orthology (KO) [BR:ksn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ksn03009]
    43587977 (CI109_106495)
Ribosome biogenesis [BR:ksn03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    43587977 (CI109_106495)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_TEP1_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta EIF3I WDR55 Beta-prop_TEP1_C DSE1_N WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_EML ASA1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st CFAP251_N NBCH_WD40 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_RIG_2nd NLE Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_NOL10_N WDR54 Beta-prop_WDR75_2nd Beta-prop_HPS5 Beta-prop_WDR35_TULP_N eIF2A Tricorn_N Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_ELP1_1st MG_like
Other DBs
NCBI-GeneID: 43587977
NCBI-ProteinID: XP_031861848
UniProt: A0AAJ8LQ82
LinkDB
Position
12:join(543090..543305,543372..543600,543669..543781,543842..543931,543988..544287,544357..544483,544568..544835,544898..545000,545070..545195)
AA seq 523 aa
MATLLPPPKRQKSAYSQSLKPPAAPEPAKVIPSIVVQFKSSEDGANLGPAINLPADTGRD
ALQMLVNKLRGEAEDPLPYSFHLVPKEPAPSTSTAPQSARVQINNSILSDALEIKASTFS
PEDVFELWCEPQAVFRVRSVGRCSATLSGHSSPILCCAHSPTGKYAATGSGDATCRVWDM
ETETPKWTLSGHKGWVLCVEWDSREKILATGGHDGQVRLWSPTTGQPYGSPLLGHTKWIT
SLAFEPLHLVPSSSPSPRLASASKDGTVRIWNTSTRKLEFVLTGHAASVNVVRWGGEGVI
YTGSSDRTVKVWSGVDGKLIRTLSEHAHWVNTMALSTDFVLRTGPFDHHGKVPKDDEEAK
ALALARYKDVTITQPESLITGSDDHTLFLWPDQASSSFSTTATPKKPVARMTGHQKQVNH
VAFSPDGRWIASAGFDNAVKLWEGRTGKFVASLRGHVAAVYRVAWSADSRMLVSASKDTT
LKLWNLKTYKIRMDLPGHTDEVYCVDFVADKVVSGGRDKTVKM
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggccaccttactcccacctcctaaacgacaaaagtcggcatactctcaatcgctcaaa
cctccagctgcgccagaaccagcaaaggtcatcccttccatcgttgtccagttcaaatct
tcggaagatggtgccaatctcggtccagcgatcaatctcccggctgataccggcagagat
gcgttgcagatgttggtgaacaagctcagaggggaggcagaagacccgttaccatactct
ttccacctcgtgcctaaagaacctgcaccgtccacatctacagcacctcaatctgccaga
gtccaaatcaacaactctatcctctccgatgccctcgagatcaaagccagcaccttctct
cctgaagatgtgttcgagctgtggtgtgagccacaagctgtgtttcgggtacgaagtgtt
ggacgatgtagtgcgaccttgagtggtcactcatcacccatcttgtgctgtgcacactcg
cctacgggtaaatatgctgcaacggggtcaggagatgccacttgtcgagtgtgggacatg
gaaacggagacgccaaagtggacattgtcaggtcataagggatgggtgctttgcgttgaa
tgggactctagggaaaagattcttgcgacaggtggtcatgacggacaggttcgactttgg
tcacctacaactggccaaccgtacggctctcccttactaggtcacaccaaatggattacc
tcgctcgctttcgaacctcttcatcttgtcccttccagctctccttcgccccgacttgca
tctgcgtcaaaagatgggacagtcagaatatggaacacctctacgagaaagctcgagttc
gttttgacaggtcatgcggcgagtgtgaacgttgtgagatggggcggggagggtgtcatc
tatactggaagcagtgataggactgttaaggtctggagcggtgtggatggaaagcttatt
cgaacattgtcggaacacgcccattgggtcaacaccatggcactgagtactgattttgtt
ctccgaactggacctttcgaccaccatggcaaagtgcccaaggatgatgaggaagccaaa
gccctcgccttggctcggtataaggatgtcaccatcacccagccggagtccctcattact
ggatcagacgaccacacattgttcctttggcccgatcaggcatcctcttcattctctacc
actgcgacacccaagaaacccgttgcgaggatgaccggacatcaaaaacaggttaatcac
gtcgccttttctcctgacggaagatggattgcaagtgctggatttgataatgctgtcaag
ctttgggagggaaggacgggaaaattcgtggcgagtcttcgaggtcatgttgcggcggtg
tacagagtagcttggtcagcagactcgaggatgctcgtcagcgcaagcaaggacacaacg
ttaaagctttggaacttgaaaacgtacaagatccgaatggacttaccgggtcacactgac
gaggtgtactgtgtcgatttcgtcgcggacaaggtcgtcagtggtggaagagataagact
gtcaagatgtga

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