Kwoniella shandongensis: 43588848
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Entry
43588848 CDS
T11156
Symbol
CI109_100529
Name
(RefSeq) uncharacterized protein
KO
K10756
replication factor C subunit 3/5
Organism
ksn Kwoniella shandongensis
Pathway
ksn03030
DNA replication
ksn03410
Base excision repair
ksn03420
Nucleotide excision repair
ksn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
43588848 (CI109_100529)
03410 Base excision repair
43588848 (CI109_100529)
03420 Nucleotide excision repair
43588848 (CI109_100529)
03430 Mismatch repair
43588848 (CI109_100529)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ksn03032
]
43588848 (CI109_100529)
03036 Chromosome and associated proteins [BR:
ksn03036
]
43588848 (CI109_100529)
03400 DNA repair and recombination proteins [BR:
ksn03400
]
43588848 (CI109_100529)
DNA replication proteins [BR:
ksn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
43588848 (CI109_100529)
DNA Replication Termination Factors
ELG1-RFC complex
43588848 (CI109_100529)
Chromosome and associated proteins [BR:
ksn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
43588848 (CI109_100529)
DNA repair and recombination proteins [BR:
ksn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
43588848 (CI109_100529)
Check point factors
HRAD17(Rad24)-RFC complex
43588848 (CI109_100529)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
AAA_22
AAA_11
TPK_catalytic
AAA_16
Rep_fac_C
Motif
Other DBs
NCBI-GeneID:
43588848
NCBI-ProteinID:
XP_031861189
UniProt:
A0A5M6C0P1
LinkDB
All DBs
Position
1:join(1483801..1483821,1483908..1483973,1484034..1484093,1484159..1484209,1484279..1484373,1484438..1484535,1484606..1484787,1484855..1485163,1485290..1485364,1485414..1485481,1485548..1485568,1485630..1485657)
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AA seq
357 aa
AA seq
DB search
MSLWVDKYRPRTLDDLHYHEELSSRLRSLAASGDFPHILFYGPSGAGKKTRIMCTLRELY
GPGVEKLRIDQRVFVTPSNRKLDVNVVQSNYHIELTPSDVGMYDRVVIQDILKEIAQTQQ
VDLNAKQRFKVVIINEADSLTRDAQAALRRTMEKYMNNMRLILCANSTSKIIAPIRSRCL
LVRVAAPTDDEMSKVLHHVAKKERFSLPSPACQSILTSSSGNLRKALLVFEAMKMQKPDL
AGGDIDVAKPDWETYCAKVADSILQEQSAQRLLDVRGKIYELLSHCIPPTVVLKTIAERL
VDKVDDTLKPQIIHWAAYYELRMRMGSKKIFHIEAFIAKVMTVYKQFHLMGYIDDFE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttgggtcgataagtaccgacctcgtactctggatgatctgcactaccatgaa
gagctctcatcccgcttacgatcactagctgcctcgggggacttccctcatatcctattc
tatggtccttcaggagccgggaagaagacgaggatcatgtgtacgctgcgagaattgtac
ggtccaggtgtagagaagcttcgtatcgatcaacgagtcttcgtcactccttctaaccga
aaattagacgtcaatgtcgttcagtcaaattaccatatcgagctcacaccttcagatgta
gggatgtacgatcgggtcgtcattcaggatatcctgaaggagattgcccaaactcaacag
gtcgacctgaatgccaaacaacgattcaaagtcgtcatcattaacgaagccgattctctt
actcgagatgcgcaagcggctttgcgtagaacgatggagaaatacatgaacaatatgaga
ttgatcctctgtgcgaatagtacaagtaagatcattgccccgatcaggagtagatgcttg
ctcgtgagagttgccgcaccgacggatgacgagatgtcaaaagtcctccaccacgtcgcg
aagaaagaacgtttctccctcccatcccccgcatgccaatctattttgacctcttcatct
ggtaatctccgaaaagcattactcgtcttcgaagctatgaaaatgcaaaaaccagatttg
gcaggaggcgatatcgacgttgcgaaacctgattgggagacttattgtgccaaagtcgcc
gattcgatcttgcaagaacagagcgcacagagattgttagatgtaagagggaagatttac
gagttgttgagtcattgtatccccccgacagtggttttgaagacgatcgcagagagatta
gtggacaaggtggatgacacgctgaaaccccagatcatacattgggcagcatattacgag
ctacgaatgagaatgggatcgaagaagatcttccacatcgaggcgttcatcgcaaaggtc
atgaccgtgtacaagcaattccacctaatgggctacatcgacgactttgaatga
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