KEGG   Kwoniella shandongensis: 43588855
Entry
43588855          CDS       T11156                                 
Symbol
CI109_102289
Name
(RefSeq) uncharacterized protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
ksn  Kwoniella shandongensis
Pathway
ksn03040  Spliceosome
ksn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ksn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    43588855 (CI109_102289)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    43588855 (CI109_102289)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ksn03041]
    43588855 (CI109_102289)
   04121 Ubiquitin system [BR:ksn04121]
    43588855 (CI109_102289)
   03400 DNA repair and recombination proteins [BR:ksn03400]
    43588855 (CI109_102289)
Enzymes [BR:ksn01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     43588855 (CI109_102289)
Spliceosome [BR:ksn03041]
 Complex B
  Other components
   Prp19 complex
    43588855 (CI109_102289)
 Complex C
   Prp19-CDC5 complex
    43588855 (CI109_102289)
Ubiquitin system [BR:ksn04121]
 Ubiquitin ligases (E3)
  U-box type E3
   43588855 (CI109_102289)
DNA repair and recombination proteins [BR:ksn03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    43588855 (CI109_102289)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz WD40_WDHD1_1st Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_Gbeta EIF3I Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_VPS8 U-box Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_IFT140_1st eIF2A PEP5_VPS11_N WD40_like zf-Nse
Other DBs
NCBI-GeneID: 43588855
NCBI-ProteinID: XP_031860833
UniProt: A0A5M6C2W4
LinkDB
Position
4:join(719482..719497,719556..719639,719702..719770,719830..719959,720023..720109,720161..720298,720346..721345)
AA seq 507 aa
MFFCAISGSPPTAPVVSKTSGTVYEKALIERYIEENGTDPISGEALTKEDLIDVKAKPST
IPPRPANQTSIPALLTALQSEYDAIMLESLEIKKAFQSSRQELANALYREDAATRVIARL
MKERDEARQALSSIQSTIGFQPPAAAEAPVEDVEMAPEGALPSEVEAKIMETNQTLSSGR
KKRKPAPGYTKADDVKAFVQTSHVPSLHATKPAGITALDLAKDGNVVVTGGADKAVQIFD
LESSKVLGTLKGHTKAVTHVAFREQEGEPRLAVSASADKTVRLWGEDNGKWSAKGTMSGH
KGEINGLAVHPSGAYVAAGSADSTWSLYDIAEAKEVVKYAAIPGIDGSFSYTSFAVHPDG
VLHGGGTKDGAVRVWDARQSTSLAATLSSHSSDLTTLSFSENGYYLATASSSEPTVKIFD
LRKLDVLNSWTLPSENTISEVRFDPSAQFLSVVGTDLRVYANKTWDELLKFEENAGVLTG
ARFGKLGSEIVLSGLDRTLRVLGAKTD
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgttcttctgtgctatttcgggctctcctcctaccgcccctgtcgtctcaaagacctca
ggaactgtttacgaaaaagctctcatcgagcgatatatcgaggagaatggtaccgacccc
atctctggcgaggctttgaccaaggaggatcttattgacgtgaaagccaaaccttccacg
atccctcctcgaccggccaaccaaacgtcgatccccgctcttctcactgcgctgcaaagc
gagtacgatgcgatcatgcttgaatcgttggagatcaagaaggcgttccaaagttctcgg
caagaacttgccaacgctttgtaccgagaggacgcggctaccagggtcattgctaggttg
atgaaggagcgagacgaggccagacaggctctgtcatccattcaatcgaccattggcttc
caaccgcctgctgctgccgaggctcctgttgaggatgtcgagatggctcccgagggtgct
cttccttcagaggttgaggctaagatcatggagaccaaccaaacactctcatctggacga
aagaagagaaagcctgcacctggttacaccaaggccgacgatgtcaaggctttcgttcaa
acctctcacgttccctcgcttcacgctactaagcctgccggtatcactgctctggacctc
gccaaggacggtaacgtcgttgtgactggtggtgcggacaaggctgttcagatcttcgac
ctcgaatccagcaaggtgctcggtaccctcaagggtcacaccaaggctgtcacccacgtc
gctttccgagaacaagagggagaacctagattggctgtcagtgcgagtgcggacaaaaca
gtcagactttggggcgaggacaatggcaagtggagcgcgaagggtaccatgtctggtcac
aagggagagatcaacggtttggccgtccacccatccggtgcatacgtcgctgctggttcc
gccgattctacgtggagcttgtacgacatcgctgaggccaaggaggttgtcaagtacgct
gctatccctggtatcgacggttcattctcctacacctcgttcgccgtacaccccgatggt
gtcctccatggtggtggtaccaaggacggtgcggtccgagtgtgggatgctcgacaatcc
acttctctcgctgccactctctcatcacactcttccgaccttaccacactcagtttctct
gaaaacggttactaccttgctactgcgtcgtcttccgagcccaccgttaagatcttcgac
ttgcgaaaactcgacgtcctcaactcatggaccctcccctccgaaaacaccatctctgaa
gtccgattcgacccttctgcacagttcttgtcggtggtcggtaccgatcttcgagtgtac
gccaacaagacctgggacgagttgctcaagtttgaggagaacgccggtgtattgaccgga
gctagattcggcaagttgggatcagagatcgttcttagtggtttggatagaacactcaga
gtgttgggcgcgaagactgattag

DBGET integrated database retrieval system