Kwoniella shandongensis: 43589376
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Entry
43589376 CDS
T11156
Symbol
CI109_104036
Name
(RefSeq) uncharacterized protein
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
ksn Kwoniella shandongensis
Pathway
ksn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
43589376 (CI109_104036)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ksn03041
]
43589376 (CI109_104036)
04121 Ubiquitin system [BR:
ksn04121
]
43589376 (CI109_104036)
Spliceosome [BR:
ksn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
43589376 (CI109_104036)
Ubiquitin system [BR:
ksn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
43589376 (CI109_104036)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
43589376
NCBI-ProteinID:
XP_031860467
UniProt:
A0A5M6C2S4
LinkDB
All DBs
Position
7:join(438112..438320,438471..438661,438734..438835,438890..439251,439318..439537,439595..439956,440021..440351,440424..440469,440545..440749)
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AA seq
675 aa
AA seq
DB search
MSSMNQDSLTLEETNKVRISLGLTPIGAAPAEGEDVPVDKDAEAEANFAQRKEDMRKAKE
EKDIKERIEKARNRSALNAKLKGSTLGDNNADDSLDAKSWIKKQKKREKQRAKEMAEARA
RDMEEQDKAVYDENDLTGLKVAHDADDFEEGQDVILTLKDSRVLEGDEDELQNVNLVDDA
AVKAAKERKRKAAAQYTGYDDEEFDENRIGQRAEVLSKYDDEFASGKVKSEGFRLGAPVE
KKMKITDEDTEMIGAAPATKVKLNIDYTKEFDVSDYAKEGEAGFKKPKKKKAKRSARRAE
VDDEEINGMEVDQKPTFSRRQVGDGPDNLVDDDDLQAALSRARRENAKKKPRAKPEDIAA
QLAQQRQEEETAPQEANDDDDGRITFDETSEFVRNVTLESLAAPVKRERAATPPTQQEQA
VVVKIERPEDGEVDEDEEMESEDEDEALAEIAAREGMSLAEYRLKIDSQLNEIETIKQEN
AEIGTEAEPVVGNGMAGILSLLRHQGAIKIRTAEDEERERVQKQKDLWLADHRRRMAQRE
MERIAARGGNKDQAQREWENRMREQQEAKDALESYRNYKPDVNIVYHDEFGREMTPKEAW
KSLSHKFHGKTSGRMKTEKRLKKIAEERKQYTMNATDTPTGMTDAFSRRQHKTGEAHMVL
SVGNKGSVQMSNKKR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgatgaatcaggattcgctcactctcgaagagaccaacaaggtccgaatctcc
ctcggtctcacacctatcggagcagcacctgctgaaggggaagatgtccccgtcgacaag
gatgcagaggcagaggcgaatttcgctcagcgtaaagaggatatgaggaaggcgaaagag
gagaaagatataaaagagagaatagaaaaagcccgaaatcgttccgccctcaatgctaag
cttaaaggatcaactttgggagacaacaacgcggacgacagtctcgatgcgaagagctgg
atcaagaagcagaagaagagggagaagcagcgggcaaaggagatggcagaggctagagcg
agagatatggaagagcaagataaagcggtgtacgatgagaatgatttaacgggattgaag
gtcgcacacgatgcggacgactttgaggaaggacaggacgtgatcttgactctgaaagat
agcagagtccttgaaggagatgaggacgagctgcaaaatgtcaacctggttgatgacgcc
gcggtcaaagccgcaaaggaacgaaaacgaaaagccgccgctcaatataccggatacgac
gatgaagagttcgacgagaacagaataggacaaagagcagaagtgttgagcaaatacgac
gacgagttcgcttcgggcaaggtcaagtcggagggattcagattaggtgcacccgtggag
aagaagatgaagatcacagacgaggacacggagatgattggagcggctcctgcgacgaaa
gtcaagttgaatatcgactatacgaaggaatttgacgtctcagattatgcgaaagaggga
gaagcgggtttcaagaagccaaagaagaagaaggctaagcgatccgcaaggcgagccgag
gtggatgacgaagagataaacggcatggaggtggaccaaaagccaacattctcgcggaga
caagtaggagatggaccggacaacttggttgatgacgatgatctgcaagctgcattgtca
cgagcgaggagagagaacgcgaagaagaagccgagggcgaagccagaggatatagctgcg
caactcgcccaacaacggcaagaagaggagacggcgcctcaagaggctaatgatgacgat
gatgggcggatcacttttgatgagacatcagagttcgtccgaaatgtcacgctggaatca
ctcgctgcacctgtcaaacgagaacgtgccgccacacccccaacgcaacaagaacaagca
gtagtcgtcaagattgaaagacctgaggacggcgaggtggacgaagatgaagagatggag
tcggaagatgaggatgaggctctggccgagatcgcagcacgagagggcatgtcgttggcc
gagtatcgactgaagatcgattcacaattgaatgagatcgagacaatcaagcaggagaac
gcagagatcggaacggaagccgaaccggtggtaggaaacggtatggctggtatcttatcc
ttactccgacatcaaggcgctatcaaaatccgcacggcagaggatgaagaacgggaacgt
gtccaaaaacaaaaagatctttggctggcggatcacagacgtcgtatggctcaacgtgag
atggaaaggatcgcggcgcgaggaggcaataaggatcaagcgcaacgagagtgggagaac
aggatgcgagagcagcaagaagcgaaagatgcgttggaatcgtatagaaattacaagcca
gatgtcaatatcgtctatcatgacgaatttggaagagagatgacaccgaaagaggcctgg
aagagtctgtcccataaattccatggaaagacttccggacgaatgaagacggagaaacga
ctcaagaagattgccgaagaacgtaaacaatatacgatgaacgctaccgatactccgacc
ggtatgacggatgctttctcacgacgacagcacaagacgggtgaggcacatatggtcttg
agtgttggtaataagggatccgtacagatgtcaaacaagaagcgctaa
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