Kwoniella shandongensis: 43589538
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Entry
43589538 CDS
T11156
Symbol
CI109_104362
Name
(RefSeq) uncharacterized protein
KO
K10609
cullin 4
Organism
ksn Kwoniella shandongensis
Pathway
ksn03420
Nucleotide excision repair
ksn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
43589538 (CI109_104362)
09124 Replication and repair
03420 Nucleotide excision repair
43589538 (CI109_104362)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ksn04121
]
43589538 (CI109_104362)
03400 DNA repair and recombination proteins [BR:
ksn03400
]
43589538 (CI109_104362)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ksn04147
]
43589538 (CI109_104362)
Ubiquitin system [BR:
ksn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
43589538 (CI109_104362)
DNA repair and recombination proteins [BR:
ksn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
43589538 (CI109_104362)
TCR (transcription coupled repair) factors
Cul4-CSA complex
43589538 (CI109_104362)
Exosome [BR:
ksn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
43589538 (CI109_104362)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
C2_TCB1
Motif
Other DBs
NCBI-GeneID:
43589538
NCBI-ProteinID:
XP_031860352
UniProt:
A0A5M6BX59
LinkDB
All DBs
Position
7:complement(join(1339042..1339092,1339144..1339347,1339436..1339614,1339679..1339944,1340006..1340107,1340163..1340223,1340283..1340498,1340575..1340979,1341047..1341360,1341419..1341603,1341662..1341954,1342026..1342191))
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AA seq
813 aa
AA seq
DB search
MTSLILLPSQSDAFSAYQPSKNAHVDILHPTTLGKKRDPSGSGKEGVKTIRLSLPAQPAP
PPVKDQLNTLLSAVAPLLSGQQTAHSYHHLSSICHTLVLQPHTLGPTIYTRVKEELEKST
AGLAREWRGGIMAREKGWLSTLVQGWKAFEGRVSLLSAVFVYLDRVYSNSSNGITSIREL
SIATFKKFIWENEILAEKTRDEVLAWVTAEREAGSPSTDVRPTISSVSALAKLLSTFSTL
SEPFVDLTTSYYQSSSMSYVDSVEQGGMSATKYVEWVLEKVDEEKERGEACLSIEVAERV
VQVVRREAGEEKGTKIIQRALDEAMDNADSPALARLYQLSVDVNVFPLFFRALQDHLEAR
LKTIISDPANDPHMIDGTLKLKRFADKAVADLFPAVIADVGEVDKEESEKAREEKEALEK
KRTERTREFELEEAIRTGFKLGMGSRQNAPAEWIAKHLDVAMRKGQGSGTEAEFNTHLDE
IIALIGFTKDKDVFKAFYSSQLAKRLLLSKSASDDMERNMIVKLQKEMGEEFTTGDVMMK
DLQLSETLVKAYQSAQAKNPEQFKESGNFTANVLTESAWPAYPLLKDGWNFQLTPDLQSS
VDAFTSWYSTQHKNRQLSWRFQLATVTLTGRFPSGKYEIGVSLFQAVVMLQFNEVDTLTF
KELKDRTGIEAQELIRTVQSLALGRKGTRVLLKKPPGKEINPTDVFAWNKGFTSDRIKFK
INQIQQDMSAEESRKTNEQVAVDRVSVLEATIVRIMKARKKLTLQLLIDAVVSDVVKRFP
PDVKEIKKRVESLIEREFLMRDEEERGVLHYLA
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgctcattctgttgccatcgcagagcgatgctttctcggcatatcagcctagt
aagaatgcgcatgtggatatactccacccgacaacgctaggaaagaaacgcgatccttcc
gggtcggggaaggaaggggtcaaaacaatcaggttgtcacttcccgctcaacctgctccg
ccaccagtgaaggatcagctaaataccttgctctcggccgttgcccctttactttccggc
caacagactgcccattcataccaccatctctcatcaatatgtcataccctcgtgcttcaa
ccgcacacacttggacccacgatctatactcgtgtcaaggaagagcttgaaaagagcaca
gctggtctggctagagaatggagaggtggcataatggctagagagaaggggtggttgagc
acactagtgcagggttggaaggcgttcgaagggagagtgtctctcttatcagccgtattc
gtgtatctcgatcgggtatattccaactccagtaacgggatcacatcaatacgcgaactt
tcgatcgctacattcaagaagttcatctgggagaacgagatcttggcagagaaaactaga
gatgaggttcttgcttgggtcactgctgaacgagaagctggcagtcccagcacagacgtt
cgacctaccatctcttccgtctctgctcttgccaaactgctttctaccttttctaccctt
tccgagccattcgtcgatctcaccacatcatattatcaatccagctccatgagctacgtc
gacagcgtggaacaaggcggaatgtcggctaccaagtacgtggagtgggtattggagaag
gtagatgaggaaaaggaaagaggcgaagcgtgtctgtcaatcgaggttgcagaacgagtt
gtgcaagtcgtgaggagagaagcaggagaggagaaaggcactaaaatcatccaacgagca
ctggacgaagcgatggacaatgcagacagtcctgctctggcaagactatatcaactcagc
gtcgacgtcaacgtattcccactcttcttcagagcacttcaagatcatttagaagccagg
ctcaaaaccattatatctgatccggctaacgatcctcacatgattgacgggaccttgaag
ctgaagcgttttgccgacaaagcggtcgcagatttgttcccagccgttatagcagatgta
ggggaagtagataaagaggagtcggagaaagcgagggaggagaaagaagctctggagaag
aagaggacagagaggacaagggagtttgaactggaagaagcgattagaacagggttcaaa
ctgggtatgggaagtcggcagaatgctccagcggaatggattgcgaaacatctcgatgtg
gccatgcgcaaaggacaaggatcgggaacagaagcagagttcaacacacacctcgacgag
attatcgctctcatcgggttcacaaaagacaaggacgtattcaaggcattctattcgagc
cagctcgccaagaggttgttgcttagcaagagtgcaagtgacgatatggagcggaatatg
attgtgaagttgcagaaagagatgggagaggaattcacaacaggagacgtcatgatgaag
gatctgcagctatccgagactctcgtaaaggcataccagtcagcgcaagcgaagaacccc
gaacaattcaaagagtctgggaacttcacagcgaacgtccttacagagtctgcttggcct
gcgtatccgttactcaaggacggttggaacttccagctcacgccggatctccaatcgtct
gtcgacgcatttacgtcctggtactcgactcagcataagaaccgtcaactgtcttggcga
ttccagcttgctaccgtcactcttaccggtcgattcccaagtgggaagtacgagattggt
gtcagtttgtttcaagctgtggttatgctgcagtttaacgaagtggacactttgacgttc
aaagaactgaaagatcggacgggaattgaggcgcaggagttgatcaggaccgtccagtct
ctagcactgggacgaaagggtactcgtgttttgttgaagaagccgccaggaaaggagatc
aaccctaccgacgtattcgcctggaataagggtttcaccagcgataggatcaagttcaag
atcaatcagatccaacaagacatgtcggctgaggaatcgcgaaagacaaacgaacaagtc
gctgtggaccgggtctccgtgctcgaagcgacgatcgtccggatcatgaaggcgaggaag
aagttgacattgcaactgttgatcgatgctgttgtcagcgatgtcgtaaagaggttccct
ccggatgtgaaagagatcaaaaagagggtagagagtctgatagagcgagagttcttgatg
agagacgaagaggaaagaggggtattgcattatcttgcatag
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