Kwoniella shandongensis: 43589612
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Entry
43589612 CDS
T11156
Symbol
CI109_105086
Name
(RefSeq) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ksn Kwoniella shandongensis
Pathway
ksn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
43589612 (CI109_105086)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksn03400
]
43589612 (CI109_105086)
Enzymes [BR:
ksn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
43589612 (CI109_105086)
DNA repair and recombination proteins [BR:
ksn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
43589612 (CI109_105086)
Prokaryotic type
43589612 (CI109_105086)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
43589612
NCBI-ProteinID:
XP_065823678
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All DBs
Position
9:join(400366..400633,400723..400931,401033..401084,401157..401219,401290..401306,401372..401389,401448..401554,401649..401718,401800..401985,402101..402256)
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AA seq
381 aa
AA seq
DB search
MPPQARSISSYFLKPTSPAAAIAKASTSTSTNTSPTTPKSSTPAKRPITLSDAAKRAIEE
GLASSPLRDGSPEPASKKAKIDSSPSAPSKVADIFAKPTTTLTATPKSSTPRATSRDELR
TKFADNPRWASLLGLELDTLGEDWLLALQDELTKSYFLSLKEFVTNEQKTKQIFPPAPDI
YSWSRFCPLKDVRVVIIGQDPYHDDGQAHGLAFSVRKGVRIPPSLRNIYKEMHDEIPEFA
IPKHGDLTEWAKHGVLLLNTSLTVRAHEAGSHANKGWDQFTAAVLKVVTARLAPGPSVAA
DKGEKVAGGNGVVFMAWGAHAAKMCAGVDKNKYLILKSAHPSPLSASRGFLGNGHFVKAN
EWLEKRYGPEGGIDWKSLGGE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgccacctcaagcacgttccatctcttcgtactttctcaagccgacttcgcccgctgct
gcaatagcaaaagcttccacgtccacttccacaaataccagtcccaccacaccgaaaagc
agtactcctgctaaacgacccattactctgtcggatgctgcgaagcgtgcaatcgaagaa
gggttagcgtctagtccattgagagatggctcaccggagccggcgagcaagaaagcaaag
attgatagtagtccttcagcgccatctaaggtcgcagacatattcgcgaaaccaactact
acactcactgctactcccaaatcgtcaacaccacgagcgacgagccgcgatgaacttcgt
acaaagttcgcggataacccgagatgggcttcgttattgggtttagagctggatacgcta
ggagaagattggttattggctttgcaggatgaattgacaaagtcgtacttcctcagtctg
aaagagtttgtgacgaacgagcaaaagacgaaacagatcttccctcctgctccggatatc
tactcttggtcaagattttgcccgctgaaagatgttcgagtggtcataataggtcaagat
ccgtaccatgatgatggacaagctcatggcctcgccttctctgttcgaaaaggtgtcagg
atcccaccttctcttcgaaacatatacaaagagatgcacgacgagatccccgaattcgcc
atacctaaacatggagatctgacagagtgggccaagcacggcgtgttattgctcaatact
tccttgacggtccgcgcacacgaggccggatcacacgccaataaaggatgggaccaattc
acagctgctgtactgaaagtggtgacggcgcgactagcgccaggaccttcagtggctgcg
gacaagggcgagaaagtagctgggggcaacggggtggtgttcatggcgtggggagcacat
gctgctaagatgtgtgcgggagtcgataagaacaaataccttatcctgaaatcggcccat
ccgagtcctctctctgcgagtcgagggttcttgggtaacggtcattttgtcaaagcgaac
gaatggttagaaaagagatatggtccagagggcggtatcgactggaagagtcttggtggg
gagtag
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