Kwoniella shandongensis: 43590548
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Entry
43590548 CDS
T11156
Symbol
CI109_102673
Name
(RefSeq) uncharacterized protein
KO
K14962
COMPASS component SWD2
Organism
ksn Kwoniella shandongensis
Pathway
ksn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
43590548 (CI109_102673)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksn03019
]
43590548 (CI109_102673)
03036 Chromosome and associated proteins [BR:
ksn03036
]
43590548 (CI109_102673)
Messenger RNA biogenesis [BR:
ksn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
43590548 (CI109_102673)
Chromosome and associated proteins [BR:
ksn03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
43590548 (CI109_102673)
COMPASS/SET1 complex (yeast)
43590548 (CI109_102673)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_NOL10_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
43590548
NCBI-ProteinID:
XP_031859411
UniProt:
A0A5M6BUR6
LinkDB
All DBs
Position
4:join(1748740..1748853,1749179..1749348,1749635..1749802,1750023..1750122,1750195..1750317,1750388..1750906,1750973..1751026)
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AA seq
415 aa
AA seq
DB search
MSYSNAGPSRLPSTGGGGGSSTPPTTKGVVVPLSYELISFLKPAKQFKDALSETTSTISG
NPHNITSLSFDDTGDRLVSAGDDDTFVLWDCKKGKKIKTLYSKKYGIDHVRFTHKPGTIL
HASTKGDDHAIRYHSMHDNKYLAYFKGHTARVRSIHMSPIDDTFVTAGDDGTVRLWDLKS
NSCKGLVKDVGGSAIATLDNTGLVFAVACSETQTIMLYATQTMDLAPFMYEPLNDVAFEK
VSQPPPKPIFTSLQFSNNGDYLLVGTSSDVHYVLDSMSLKPLRRLVGHGGLERDRQGNKD
VQPRRGVSGEELSWTADSNWVVSGSADGNVLFWDLTRPNGVDKLKRDDLKEGDGGERWYM
KEIPEVQAKVLLRGNGAVSRAVRFNPRYNMMAVGGEDLTFWLPAKDEDVKMQEGW
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagttactcgaatgctggaccttctcgattaccttctactggtggtggagggggaagt
tccacaccgcctactacgaaaggcgttgtagttccattatcgtacgagctgatctccttt
ctcaaacccgccaagcaattcaaagacgcccttagcgagaccacctccacaatcagcggg
aatccacacaatatcacctcgctctcgttcgatgacacgggcgatagactggtcagcgct
ggagacgatgatacttttgttttgtgggattgtaagaagggaaagaagataaagactctc
tattctaagaaatacggtatagaccacgtccgattcacgcacaaaccggggacgatcttg
cacgcatctaccaagggggatgatcatgcgatcaggtatcattcgatgcatgataataag
tatttggcatacttcaagggacatacggcgagagttcgctccatccatatgagccctatc
gacgatactttcgtcacagctggtgatgacggtacagtgcgattatgggacctgaagtcg
aacagctgtaagggtctggtgaaagatgtcggcgggtcagcaatagctacgctggataac
accgggctagtcttcgctgtcgcttgttctgaaacgcagacgatcatgctttacgcaact
cagaccatggatctggctcccttcatgtacgaacctctgaacgatgtcgcattcgagaaa
gtatctcaaccacctcccaaacccattttcacctctctccaattctccaataacggcgac
tatctactcgttggcacatcctctgacgtgcactacgttctcgactccatgagtctcaaa
ccacttcgacgattagtcggtcatggtggacttgaacgagatcgacaaggaaacaaagat
gttcaacctcgtcgtggagttagcggcgaagaactctcctggacagcagattccaattgg
gtcgtatcaggttcagcagatggcaatgtcctcttctgggatctgacgagaccaaatgga
gtggataagttgaaacgggatgatctgaaagaaggagatggaggggagagatggtatatg
aaggaaataccggaggttcaggcaaaagtgctcttgagagggaatggagcagtgagcaga
gcagtgaggttcaatccgagatataacatgatggctgtgggaggagaggatcttacattc
tggttgccagcaaaagacgaggatgtcaagatgcaggagggttggtag
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