Kwoniella shandongensis: 43590817
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Entry
43590817 CDS
T11156
Symbol
CI109_104585
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ksn Kwoniella shandongensis
Pathway
ksn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
43590817 (CI109_104585)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksn03019
]
43590817 (CI109_104585)
03041 Spliceosome [BR:
ksn03041
]
43590817 (CI109_104585)
Messenger RNA biogenesis [BR:
ksn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
43590817 (CI109_104585)
Spliceosome [BR:
ksn03041
]
Complex B
Other components
Prp19-related factors
43590817 (CI109_104585)
Complex C
43590817 (CI109_104585)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
43590817
NCBI-ProteinID:
XP_031859020
UniProt:
A0A5M6BVT2
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Position
8:complement(join(337424..337785,337855..338651,338705..339858,339927..340721))
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AA seq
1035 aa
AA seq
DB search
MASTSDSSLITSLTSRFPLTLPIPTPLTHPHLISASDLPTEEDLLHNPDNLRSWLAYIHQ
IKERISQNEPPKSAVASPEEILLGPLASHTSREGLQALVSIYERAISVFPTSYKLWKAYY
TTRQQYVLGQLTPAAREARQHQSKRGASYKTNVREILEGAVEANEWQGGLDGVVGYEEWK
SLIATGERMLACLSHLPVPWLIHLSVLLHPKCPATFKRTYARRTFDRALRTLPPSLHGRI
WGMYLRWAEMIGGDAGERVWRRYLKVDPSLTERHIAFLLDASPPRPLAAAKYLLSIARRA
SKNLYSSLEGKSPYQLFVDFLELVERYADDVGMSEEETLELQATRKAVEDKVGESSTAED
GPDAAEEPASINGRLMRIAGPPIPLGEAKLVKPANAVSAKKGPEELPYDEDSDPSSSRLL
DVEGIVERDGLEVYKDQAGRLWTGLATYWIKRGEFDRATATFERGLAVVVTIRDFTQIFD
AYAEFSETMISTLMDALADEDNAEDEDFDVEETEADLDERMKKFEELMDRRPFLVNEVLL
RRNPNEVVEWEKRVALYGDDDERVVETYVKALDTINPRKATGPLYPLYVNFAKFYEEGGS
KDAETGEPKSEPDMDQARKIMERATKVPFKSVDELAEVWCEWAEMELRNENYDEAIRLMQ
RATTVPKNTKIDYYNDSLPPQTRLFKSLKLWSFYSDMEESIGTVDSTKAVYDKIMELKIA
NAQVIVNYAAFLEENKYFEESFKVYERGIELFHFPIAFEIWNIYLSKFVKRYGGKKLERS
RDLFEQALENCPAKFCKPLYLIYAKLEEEHGLAKRAMGIYDRAASTVQDSDKFEMFTIYI
AKATANFGLPATRPIYERALEVLPDKQTAEMCRRFARMERKLGEIDRARAIYAHASQFCD
PRIDPEFWQEWNGFEIDTGSEDTFREMLRIKRAVQASFNTETSFIAAQAAAASKGIEKPT
DVAKDAAQDAADPMAAMEREMGGSNAAASAKKTGGPAFVASTLNKTNANGISMGEEEEGG
EVANPDAIVMDDEEF
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggcatccacctccgactcttccctgataacctcacttacctctcgattcccgctcacc
ctccccatccctacacctctcactcatcctcatctcatctccgcgtctgatcttccgacc
gaagaagacctccttcataatcccgacaaccttcgatcatggctcgcgtatattcaccag
atcaaagaacggatatcgcaaaacgaacctcccaagtccgcggtcgcttcgcctgaagag
atacttctcggtccactagcttcgcatacttctcgagaaggattacaagccctcgtttca
atctacgaacgagcaatctccgtcttcccaacaagttacaagttgtggaaagcatattat
accactcggcaacagtatgtgctcggtcaactcactcctgcagcgagagaagcgagacaa
catcaatcgaagcgaggagcatcgtacaagaccaatgtgagagagatcctcgaaggtgcg
gtcgaagcgaacgaatggcaaggtggtctcgacggagtggtaggatacgaagagtggaaa
tcgttgatagccaccggagaaaggatgttggcttgtctcagtcatctacctgttccgtgg
ttgatccatctgtcggtattgctccatccgaaatgtccggcaactttcaaacgcacctat
gccaggaggacgttcgacagagcgttgagaacgctgccgccgagtttgcacggaaggatc
tgggggatgtacctcagatgggcggagatgataggtggtgatgccggcgagagagtttgg
agacgatatctcaaggtcgaccctagtttgacagaacgacacatcgccttccttctcgac
gcgtctcctcctcgaccacttgctgccgccaaataccttctctctatcgctcgacgcgca
tccaaaaacctctactcctcccttgaaggcaaatcgccgtatcaattgtttgtcgacttc
ctcgaactggtggaacgatatgccgacgacgtaggaatgagcgaggaagagaccttggag
ttacaggcgacaaggaaagcggtggaggataaagtgggagaaagcagtactgcagaagat
ggtcccgacgctgccgaagaaccggctagtatcaatggtcgattgatgagaatcgcggga
ccccccattccacttggagaagcgaaactggtcaagcctgcaaacgctgtctcagccaaa
aagggaccggaagaattgccttacgacgaggactctgatccttccagctctcgtcttctc
gatgtggagggtatcgtcgaacgtgatggtttggaggtgtacaaggaccaagcaggtcga
ctgtggactggtctcgcgacgtactggatcaagcgaggcgaatttgatcgagccacagcg
acattcgaacgtggtttagcagtggttgtcaccattcgagatttcactcagatctttgat
gcgtacgccgagttctccgaaaccatgatctcaaccctgatggatgctctcgccgatgaa
gacaacgcggaggatgaagactttgatgtggaagagacagaagccgatttggatgaaagg
atgaagaagtttgaggagttgatggacagaagaccgttccttgtcaatgaggtgttgctt
cgacgaaatccgaacgaagtggtagaatgggagaaacgagtagccctctacggtgatgac
gatgaaagggtcgtcgagacgtacgtcaaggccctcgatacgatcaaccctagaaaagcg
acaggacctctttatcccctttacgtcaactttgcaaagttctacgaagaaggaggtagt
aaggatgcggagacaggcgagccaaaatccgagccggatatggatcaggcgagaaagatc
atggagagagcgacaaaggtgcctttcaagtcggtggacgagttggccgaggtttggtgc
gaatgggcagagatggaattgagaaatgagaactacgatgaggccatccgattgatgcag
cgagcgactacggtgccgaagaacaccaagattgactattacaacgactcattaccgcct
cagacacgattgttcaaatcgctcaagctttggtcattctacagcgatatggaggagtct
atcggcacagttgactcgacgaaggccgtctacgacaagatcatggaactcaagattgcc
aatgcgcaagtgatcgtcaactacgctgcgttccttgaggaaaacaaatactttgaggag
agcttcaaggtttacgaaagagggatcgagcttttccacttccccatcgctttcgagatc
tggaacatctatctatccaagttcgtcaaacgatatggtggaaagaagctcgaacgatct
cgagatttgttcgaacaagctttggagaactgtcctgccaaattctgcaaacccttgtat
ctcatatacgcgaaattggaggaagaacatggcctcgccaaacgtgctatgggtatctac
gatcgagccgcctccaccgtgcaagattccgacaagttcgaaatgttcacgatctatatc
gccaaagctacagccaactttggtcttccagccacgagaccgatctacgagcgtgcactg
gaagtgttaccggataaacagaccgcggagatgtgtaggagatttgcgaggatggagagg
aagctgggagagattgatagagccagagcgatctatgctcatgcgagtcagttctgtgac
ccgagaatcgatccggagttctggcaagagtggaatggatttgagatcgacaccggttcc
gaagacactttcagggaaatgcttcgtatcaaacgtgccgtacaagcatcattcaacaca
gaaacatctttcatcgctgctcaagccgctgccgcttcgaaaggtattgagaagcctacc
gatgttgctaaagacgccgctcaagatgctgctgatccaatggctgcgatggagcgggag
atgggcggtagcaatgccgccgcttctgcgaagaagactggtggaccggctttcgtggcg
agcacactgaacaagacgaacgcgaatggaattagtatgggcgaagaagaggaaggagga
gaggttgccaaccctgatgcgattgtcatggatgatgaggaattttag
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