Kwoniella shandongensis: 43591257
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Entry
43591257 CDS
T11156
Symbol
CI109_100061
Name
(RefSeq) uncharacterized protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
ksn Kwoniella shandongensis
Pathway
ksn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
43591257 (CI109_100061)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksn03019
]
43591257 (CI109_100061)
Messenger RNA biogenesis [BR:
ksn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
43591257 (CI109_100061)
U7-dependent histone pre-mRNA processing factors
43591257 (CI109_100061)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
PHM7_cyt
RRM_occluded
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
43591257
NCBI-ProteinID:
XP_031858586
UniProt:
A0A5M6BRX8
LinkDB
All DBs
Position
1:complement(join(128496..128525,128592..128675,128735..129070,129134..129253,129369..129829,129974..130032,130124..130186,130308..130323,130463..130493))
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AA seq
399 aa
AA seq
DB search
MPPHAARTVFVANIPYDVSEEQLANVFSEAGPVSNVEIKFDPQTGRSKGYAFVQFYDEAT
ALSAVRNLQEAPVNGRNLRVELSTDEPGPRGRQGGGGGGGGGGGRGGRGGGGGGGGGGRY
GSHQMDDTPPPRGGGGGGYSLPAPGVDQGYGRDMPVPPPMAGGPAGERVDLNLLPQGVEV
GMGQKATDVISKTLAAISPGQMQDVMASMKMLITTNPEQARQLLSSKPQLAYALFQAMLL
MNIVDPSVLQRIQPLPAPAAAPVPSYPPAAQAPPAAYPPYPPAAAQAPPPSNYPPYPPSN
SSYRPPPNSAPGGYNAPPQPSYGGGAGSGYGAPPPAPPVASGLASLPPSAQAALSTLPED
QQQMLLQVLQLSPDQINALDPNQKASIMQLRQQFLGAAA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccacgcagctaggacggtcttcgttgcaaacatcccatatgacgtatccgag
gaacagctcgcaaatgtgttttcagaagctggaccggtatcgaacgtagagatcaaattt
gaccctcaaacgggacgatcgaagggatatgcgtttgtgcaattttatgacgaagcgacc
gcactttcagctgttcgaaatctccaggaagcaccagtgaacggtcgtaatcttcgagtc
gaattgagtaccgacgaacccggaccccgtggtcgacaaggaggtggcggaggcggcgga
ggaggaggcggtagaggtggacggggaggtggtggcggtggcggcggtgggggtcgatat
ggatctcaccagatggacgatacaccaccacctcgaggaggtggaggtggagggtattct
ctcccagcacccggtgttgatcaaggttacggacgagatatgcctgtacctccgcccatg
gctggtggtccggctggagagagagttgatctcaacttgttgccccaaggagtcgaagtg
gggatgggtcagaaggccacggacgtgataagtaagactttggcagccattagtccaggt
caaatgcaggatgtcatggctagtatgaagatgctcatcactaccaatcccgaacaagct
agacagctgttaagcagcaagcctcaactcgcatatgccctgttccaggctatgctactc
atgaacattgttgacccatccgttttacagagaattcaacctcttcctgctccagcagcg
gcacctgtcccttcctaccctcctgcagctcaagcgcctccagccgcctatcctccttac
ccaccagctgctgcccaagctcccccaccttcgaattatcctccttacccaccttccaac
tcttcataccgacccccaccaaacagtgcgccaggagggtacaacgcccctcctcagcca
tcttatggcggcggtgcgggttcaggttacggtgctcctcctcctgcaccacctgtcgct
tctggcttggctagtctgcccccttcagcacaagcggcgctgtcgacgttgcctgaggat
cagcagcaaatgttgcttcaagtcctgcaactctccccagaccagattaacgctctcgat
ccaaaccaaaaggcttcgatcatgcaattgcgacaacaattccttggggcagcggcatag
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