KEGG   Kwoniella shandongensis: 43591455
Entry
43591455          CDS       T11156                                 
Symbol
CI109_104851
Name
(RefSeq) uncharacterized protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
ksn  Kwoniella shandongensis
Pathway
ksn03020  RNA polymerase
ksn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ksn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    43591455 (CI109_104851)
  09124 Replication and repair
   03420 Nucleotide excision repair
    43591455 (CI109_104851)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ksn03021]
    43591455 (CI109_104851)
   03400 DNA repair and recombination proteins [BR:ksn03400]
    43591455 (CI109_104851)
Transcription machinery [BR:ksn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     43591455 (CI109_104851)
  RNA polymerase III system
   RNA polymerase III
     43591455 (CI109_104851)
  RNA polymerase I system
   RNA polymerase I
     43591455 (CI109_104851)
DNA repair and recombination proteins [BR:ksn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      43591455 (CI109_104851)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 43591455
NCBI-ProteinID: XP_031858401
UniProt: A0A5M6BRQ8
LinkDB
Position
8:join(1108950..1109032,1109186..1109264,1109347..1109483,1109697..1109809,1109887..1109936)
AA seq 153 aa
MSDDERMDEAGFEGGDYAEDYLDPDMINYEAEGENADNEEDGMNGGEIDETMIVESNAPT
DGEKQRTGKAAKPNEVRVTTPYMTKYERARVLGTRALQISMNAPVLVPVEGETDPLEIAL
KELAAKKIPLVIRRYLPDNSFEDWKVEELIIQE
NT seq 462 nt   +upstreamnt  +downstreamnt
atgtcggacgacgagagaatggacgaagctggattcgagggtggtgattatgctgaagac
tacctcgaccctgatatgatcaactacgaggcagagggagagaacgccgacaacgaagaa
gacggtatgaacggcggtgagatcgacgagaccatgatcgtcgaatcaaacgcacccacc
gacggagagaaacaacgtactggaaaagctgcgaaaccgaacgaggtacgagtgacaacg
ccgtatatgacgaaatatgaaagagcaagagtgttgggtacaagagcgttgcaaattagt
atgaatgcacccgtcttggtaccggtggaaggagagacagacccacttgagattgctctg
aaagaactggcagcgaagaagatccctctggtcatacggcgatatcttcctgacaactcg
ttcgaagattggaaagtcgaggaactcatcattcaagaatag

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