KEGG   Kwoniella shandongensis: 43592531
Entry
43592531          CDS       T11156                                 
Symbol
CI109_101256
Name
(RefSeq) uncharacterized protein
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
ksn  Kwoniella shandongensis
Pathway
ksn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ksn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    43592531 (CI109_101256)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ksn03041]
    43592531 (CI109_101256)
Enzymes [BR:ksn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     43592531 (CI109_101256)
Spliceosome [BR:ksn03041]
 Complex C
  Other components
   Step II factors
    43592531 (CI109_101256)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C WHD_HA2 S1 DEAD AAA_22 AAA_30 nSTAND3 AAA_19 AAA_16 PhoH T2SSE Sigma54_activ_2 ATPase NB-ARC nSTAND_NTPase5
Other DBs
NCBI-GeneID: 43592531
NCBI-ProteinID: XP_031857376
UniProt: A0AAJ8LHE0
LinkDB
Position
2:complement(join(1605151..1605201,1605311..1605471,1605527..1605646,1605697..1605771,1605848..1605886,1605942..1606044,1606100..1606609,1606663..1607186,1607239..1607362,1607420..1607662,1607713..1608040,1608089..1608249,1608313..1608511,1608563..1608722,1608770..1609430,1609486..1609605))
AA seq 1192 aa
MSTDKELYKLELLSLVSRVSQELFNHTKLQDKKLAEFVIALHEQSKTPEAFQIKLGEIGA
DFPDSFVKNLDRLIVTMHPKYKRKAAKAKAAAMSGKSSEKNGAILDEQKQLQARKFPGLS
VPDRDWTTADKYLEERASKEPSTEKLPESLSVDDTMAQLAAVAQRRNRPAAEDYLDGEPA
AKKMRNGDGSGGGRDNGYGSRLGSNNGYGSSGGPDDRRGRSGRPSMDERPVLYKIYNGSI
SNVRDFGAFVTLEGVQGRTEGMVHVSSITNGRVTAAGDFVKRGQPVKVKVMSIAGTKVGL
SMKDVDQTTGADLSPHLRVKTAEEIANDERKMAARPTSGSNATPLIHVDERKGSSAKRLS
SPERFEIKQLIASGAVDAADYPDLDEDFNTSVANPEVEEDIDIEVNEVEPSFLSGQTKVT
LELSPVKIIKAPDGTLNRAALAGASLAKERRDLKRLEANEQADSESREINQPWLDPMASQ
TDRQFASDIKGNLMGQKAALTPAWKAANKVVSYGRITSLSIQEQRRSLPIYKLRDQLVQA
IRDNQILVVVGDTGSGKTTQMAQYLAEEGFLEKGRLGCTQPRKVAAVSVAKRVAEEVGCR
LGAEVGYTIRFEDLTSPETKIKYMTDGMLLRELLVDPDCSRYSVIMLDEAHERTIATDVL
FGLLKKACKRRPDLKLICTSATLDAAKFATYFWGCPIFTIPGRTFPVETLYTKEPEPDYL
EASLITILQIHLMEPAGDILLFLTGQEEIDTACEVLYERVKALGPQVPELLILPVYAALP
SEMQSRIFDPPPPGARKVVIATNIAETSITIDGIYYVIDPGFAKQNAYDPKLGMDSLVVT
PISQAQARQRSGRAGRTGPGKCYRLYTEIAYRNEMLPNPIPEIQRTNLASTILTLKAMGI
NDLISFDFMDPPPAATMLTALEQLYALGALDDEGLLTRIGRKMADFPLDPPLSKMLIKSV
DYGCSEEALTIVAMLQAGGQVYYRPKDKQAQADAKKAKFHQPEGDLLTLLAVYNGWKLSK
FSNPWCFENFIQTRAMKTAQDVRKQLIGIMDRYKHDLVSCGTNFNRVRMAICSGFFRNAA
KKDPTEGYKTLVEGTPVSIHPSSALFQRPPEWCVYYELVLTAKEYMHQVTLIEPKWLSEV
APTFFRVADQNKISKRKASEKIEPLFDRFAANKDDWRLSKQKRATRSSQTFG
NT seq 3579 nt   +upstreamnt  +downstreamnt
atgtcaacggacaaagagttatacaagctcgagctgctgtctctggtgtctagagtctct
caggagctcttcaaccacaccaagctgcaggacaagaagctcgccgagttcgtcatagct
ttgcacgagcagagtaaaactcctgaagcgtttcaaatcaagttgggagagatcggtgcc
gacttcccggactcctttgtcaagaacctcgaccgtttgatcgtcacgatgcacccgaaa
tataaacggaaagccgccaaagccaaggcggctgccatgtccggcaagtcctcagaaaag
aacggagcgatactagatgaacagaaacaactgcaggcccgtaaattcccgggcctgtct
gtgcccgaccgggattggaccacggcagataagtacctggaggagagggcaagcaaagag
cctagcacagaaaaattgccggagtcattatcggtggatgatacgatggctcaacttgct
gctgtggctcaacgccggaatcgaccggcagctgaggactatctagatggagaaccagct
gcgaagaagatgcggaacggagacggatctggtggaggtcgggacaacggttatggcagt
cgactgggttccaacaatggctacggctcgtctggaggcccagatgatcgtcgagggcgt
agtggacgcccttctatggacgagcgaccagtcttgtataagatatacaatggaagcatc
tcaaacgttagagactttggagctttcgttacactggaaggtgtccagggtaggaccgaa
ggtatggttcacgtgtccagcatcaccaatgggcgagtgacagcagcaggtgatttcgtg
aagaggggtcagccagtgaaggtgaaggtcatgtcaatagcaggaaccaaagttggcttg
agcatgaaggatgttgatcaaaccacgggcgccgacctttccccacatcttcgcgtcaag
actgccgaagaaatcgcgaatgacgagcgaaaaatggccgcccgaccgacatccggaagc
aatgcaactcctttgattcatgtggacgaacgtaaagggtcaagtgctaaacgactgtcc
agtccggaaagattcgagatcaagcaactgattgcaagtggtgctgtggacgctgcggac
tatcccgatctagacgaagacttcaacacatctgtagcaaatcctgaggttgaggaagac
atcgacatcgaagtcaacgaagttgaaccgtcattcttgtcaggccagacaaaggtcact
ttggagctttccccagtcaagatcatcaaagctccagatggaaccctcaaccgtgccgcg
cttgcgggcgcctcactagctaaagaacgtcgagatctaaaacgattggaagccaacgaa
caagccgattccgagtcccgagaaatcaatcaaccttggctggatcctatggctagtcaa
actgaccgacagttcgcgtcagatatcaagggcaacttgatgggtcaaaaagctgctttg
acacccgcgtggaaagcagcgaacaaggtggtctcctacggtcgaatcacatcccttagt
atacaagaacagagacgaagcttgcccatttacaaactaagggatcaactcgtgcaggcc
atccgcgataaccaaatcttagtcgttgtcggagataccgggtctgggaagaccacgcag
atggcccaatatcttgccgaagaagggttccttgagaaaggccgacttggatgtacacag
ccccgaaaagtagccgctgtttcagttgccaagcgagtagcagaagaagtcggctgccga
ctgggtgctgaggttggatacaccatccgattcgaggatctgacaagtccggagaccaaa
atcaaatacatgactgatggtatgctcttgcgtgaactactggtcgatcctgattgctct
cgatattctgtcatcatgctggacgaggcccacgagcggacaattgctaccgatgttttg
ttcggcctgttgaagaaggcatgtaagaggcgaccagatctcaagctcatctgtacttct
gcgacactggatgccgccaagttcgcgacttacttctggggttgtccaattttcaccatt
cctggtcgaacattccctgtcgagaccctatacaccaaggaacccgagcccgattacctt
gaagcgtccttgataaccatcttgcaaatacatttgatggaacctgcgggtgacattttg
ctcttcttgactggtcaggaagaaatcgataccgcttgcgaggtgctatacgagcgtgtc
aaagccctgggtccacaggtgccagagctcctcattcttccggtctacgctgcgctcccg
tcagaaatgcagtcgcgaatctttgatccccctccaccgggtgctcgaaaagtcgtaatt
gcgaccaatatcgcagaaacaagtatcacaatagatggtatctactatgttatcgatccg
ggattcgccaaacagaacgcttatgatcccaaactgggcatggactctttggttgtgacg
cccatctcgcaagctcaagcacgacagcgatccgggcgagccggtcgtaccggaccgggg
aaatgctatcgactttacacggaaattgcgtatcggaacgaaatgttgccgaatcccatt
cccgagatccagagaaccaacttggcatccaccattctcactctgaaagcaatgggaatc
aacgacctcatcagcttcgacttcatggacccaccgcccgcggcaaccatgttgacagct
ttggagcagctctacgcccttggggctctggacgatgagggcttgctgaccagaatagga
cggaaaatggctgatttccctctggatccacccttgtctaagatgctcatcaagtcggtc
gactatggttgctctgaggaagctttgactatcgttgctatgcttcaagcgggtggtcag
gtgtattaccggcccaaagacaagcaagcgcaggcggatgcgaagaaggccaaattccac
cagcctgaaggtgatttgttgaccctactggctgtgtacaacggttggaagctatcgaag
tttagcaatccctggtgcttcgagaactttattcagactcgagctatgaagactgcccaa
gatgtgagaaagcaattgatcggtatcatggaccgttacaagcacgatttagtgtcttgc
ggtaccaacttcaatcgagtgcgcatggccatctgctctggattcttcagaaacgccgca
aagaaagatcctaccgaagggtacaagacgctggtcgaaggtaccccagtcagcattcat
ccatccagtgctctattccagcgacctccagagtggtgtgtctattacgaacttgtgctc
actgccaaggagtacatgcaccaagtcactctcatagaacccaaatggctttcggaggtg
gcacccacctttttccgcgtcgccgatcagaacaagattagtaaacgtaaggcttcagaa
aagattgaacctctcttcgatcgatttgctgcgaacaaggacgattggcgtctcagcaaa
caaaagcgagccacgcggtcttcacagaccttcggctag

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