Kwoniella shandongensis: 90829974
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Entry
90829974 CDS
T11156
Symbol
CI109_104213
Name
(RefSeq) uncharacterized protein
KO
K12828
splicing factor 3B subunit 1
Organism
ksn Kwoniella shandongensis
Pathway
ksn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
90829974 (CI109_104213)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ksn03041
]
90829974 (CI109_104213)
03036 Chromosome and associated proteins [BR:
ksn03036
]
90829974 (CI109_104213)
Spliceosome [BR:
ksn03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
90829974 (CI109_104213)
Complex B
90829974 (CI109_104213)
Complex C
U2 SnRNP specific factors
90829974 (CI109_104213)
Chromosome and associated proteins [BR:
ksn03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
90829974 (CI109_104213)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
TOR1L1_N
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_ECM29
HEAT_EZ
Adaptin_N
HEAT
TIP120
MMS19_C
Cnd1
IFRD
DUF5742
Motif
Other DBs
NCBI-GeneID:
90829974
NCBI-ProteinID:
XP_065823510
UniProt:
A0AAJ8LN54
LinkDB
All DBs
Position
7:915315..917780
Genome browser
AA seq
821 aa
AA seq
DB search
MSDPYPALQSYTAPQEILDEHAELADEEDAPDAFDDKARSKQVAARQSDYHLRRFNRQEG
QGEGEDESYEDRMRRINLQKEEERVRRFKEQLEKDKAQDDQMMVDDKTPPREIAAGDTPP
RATAEDTPPRDLAGGDTPPRDVKKRRWDVDEVKEEPGTTKRRSRWDQTPAEVPEKKRSRW
DQTPAASTSTSAVAPTPSATGVMMVEDKRYRRMIDEELDSLLPGADEGYAVVAVPDDYKP
GPSVRKMVPATAETGFMMQDESDAARARAAAGGMQGSTEQTEIEGIGTLQFLKPEDTQYF
AKVLGEGGGEEDDAAYTVEELKERKIMRLLLKIKNGTPPVRKTALRQITDRAREFGAGPL
FDKILPLLMERTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARV
EGREIISNLAKAAGLAHMISTMRPDIDHVDEYVRNTTARAFSVVASALGIPALLPFLRAV
CRSKKSWQARHTGIRIIQQIAIMMGCAILPHLRNLVDAIADGLQDEQQKVRTMTALALAA
LAESAAPYGIESFDNVLKPLWLGIRQHRGKTLAAFLKAIGYIIPLMDPEYAGYYVRECMP
ILIREFQTSDEEMRRIVLQVIKQCASTEGVTPTYIKEEVLPEFFKAFWVRRMALDKRNYK
QLVDTTVELANKAGVSEIVSRVCNDLKDESEPFRKMVMETVTKVVANVGAADIDERLEVL
LIDGIIFAFQEQTLEDTVMLDGFATVVNALGGRVKPYLPQIVSMILWRLTNKSAKVRMLA
ADLTTRLAPIIKSCGEDMLLSKLGVVIFEQLGEEYPDALGR
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatccgtatcctgcgcttcagtcatacacggcgccccaggagatcctcgacgag
catgccgagctcgccgacgaggaagatgctccagatgcctttgatgacaaagcgcgatca
aaacaggtcgcggcgagacaaagcgactatcacttacgacggttcaaccgacaagaaggt
caaggggaaggagaggatgagagttatgaggatagaatgaggaggatcaacttgcagaag
gaggaggagagggtaagacgattcaaggaacagttggaaaaggacaaagcacaggatgac
cagatgatggtggatgacaagacgccaccgagagagattgcggctggtgacactcctccc
agggcaacagccgaggacacacctcctagagatcttgcaggaggggacacaccaccccga
gatgtcaagaaacgaagatgggatgtggatgaagtgaaagaggagcctggtacaacgaag
cgacgctcacgatgggaccaaacaccagcagaggtccctgaaaagaagcggtcgcgatgg
gatcagacacctgctgcgtctacatcgacatccgctgttgcacccacaccttctgcgact
ggtgtcatgatggtggaggacaagcgataccgacgcatgatcgatgaagagctcgacagt
ttgcttcccggtgcggatgaaggttacgccgtggttgctgttcccgatgactacaaaccc
ggtccctccgtccgcaagatggtccccgcgacagctgaaaccggtttcatgatgcaggac
gaatccgatgctgctcgtgctcgtgctgcggcgggtggaatgcaagggtcgaccgagcag
actgagatcgagggtattggaacacttcaattcttgaagcccgaggacacacagtacttt
gccaaggtccttggtgaaggcggtggtgaagaggacgatgcggcgtacacggtggaggag
ctcaaggagaggaagatcatgcggctcctcctcaagattaagaatggaacaccgccggtg
cgaaagactgctttgcgtcaaattaccgatcgagcgagagaattcggtgctggacccttg
tttgacaagattcttcccctgctcatggagcgtacactcgaggaccaagaacgacatctc
ctcgtcaaagtcatcgatcgaatcctctacaagcttgacgatctggttcgaccttatgtc
cacaaaatcctcgttgttatcgagcctctccttatcgacgaggactactacgcgagagtc
gaaggacgagagatcatttcgaaccttgcaaaggctgccggtctcgctcacatgatctcg
actatgcgtccggatatcgaccacgtcgatgagtatgtccgaaacactaccgctcgtgca
ttctcagtcgtcgcatctgcccttggtatccctgctcttcttcctttccttcgagccgtc
tgtcgatctaaaaagtcttggcaagcgcgacacactggtatccgtatcatccaacagatc
gccatcatgatgggctgtgccattctgccccatctccgtaacctcgtcgacgctatcgcc
gatggtctgcaggacgagcagcagaaggtcagaacgatgactgctctggctctcgccgct
ctggccgaatctgccgccccttatggtatcgagtccttcgacaacgtgcttaaacccctc
tggctcggtattcgacaacatcgaggtaagactctggcggccttcctcaaggctatcggt
tacattattcccctcatggaccccgagtacgccggatactatgtccgagagtgtatgcct
attcttattcgagagttccaaacgtcagatgaagagatgagaaggatcgttcttcaagtt
atcaagcaatgtgcttccaccgaaggtgttactccaacatacatcaaggaggaagtgctt
ccggagttcttcaaagccttctgggttcgtcgaatggctctggacaagcgaaactataag
caactcgttgatacaacggtcgagcttgcgaacaaagccggcgtctcggagattgttagt
cgtgtttgtaacgatctcaaagatgagtcagagccattccgaaagatggtcatggaaacg
gtcaccaaagtggtcgccaatgttggtgccgcggatatcgacgaacggctcgaggtcctc
cttatcgacggtatcatcttcgccttccaggaacagacgttggaggacactgtcatgctg
gatggtttcgctacggtggtgaatgcgcttggtggacgtgtcaagccctacctccctcaa
atcgtctctatgattttgtggcgacttaccaacaaatcggccaaggtccgaatgctcgct
gcggatctgactactcgactcgctccgatcatcaagagctgtggagaggatatgttgttg
agcaagttaggtgtggttatcttcgaacaactcggagaagagtatccagatgctttggga
aggtga
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