Candidatus Kinetoplastidibacterium kentomonadis: CKSOR_00002
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Entry
CKSOR_00002 CDS
T05428
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
kso
Candidatus Kinetoplastidibacterium kentomonadis
Pathway
kso03030
DNA replication
kso03430
Mismatch repair
kso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CKSOR_00002 (dnaN)
03430 Mismatch repair
CKSOR_00002 (dnaN)
03440 Homologous recombination
CKSOR_00002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kso03032
]
CKSOR_00002 (dnaN)
03400 DNA repair and recombination proteins [BR:
kso03400
]
CKSOR_00002 (dnaN)
Enzymes [BR:
kso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CKSOR_00002 (dnaN)
DNA replication proteins [BR:
kso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CKSOR_00002 (dnaN)
DNA repair and recombination proteins [BR:
kso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CKSOR_00002 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Rep3_N
DUF4559
YvzJ
Motif
Other DBs
NCBI-ProteinID:
AWD32149
UniProt:
A0A3Q8F5Z9
LinkDB
All DBs
Position
1438..2550
Genome browser
AA seq
370 aa
AA seq
DB search
MQIVSVNRDYLLKAILKVTGVVDKRQSIPILSNILLLKENKNLSILATDLEIQVTVFTKF
GYSDSNCYITLSARKLLEILKSLPCDNNVSLSLLSENRLSIISGKSKFSLQTLPYKDFPV
INQLEQFDIFVKISQKNLFDLINTTYFAMAHQDVRFYLNGLLLVFDKNIIKAVATDGHRL
AFNSMKIDYQGEYREVIIPRKNIIELIRLLNNMDDDINIDVGFNQIKFSFSDIEIISKLV
DGKFPDFNKVIPNHHKRVFSIKRDVFHGSLMRVSIMTNDKFKGILINLKKNLMSISSNNA
NHEEALEEIDIEYEYENLNIGFNVNYLLDVINNIKSNTLIFSIGNDNNSSALIRFQDHEN
FKYVVMPMRI
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattgtaagtgttaatcgtgattatttgttaaaagctattttaaaagtcactggt
gtagttgataaaaggcaatctattcctatactatctaatatattactattgaaagaaaat
aaaaatttatctattttagcaactgatttagaaatacaagtcacggtatttactaaattt
ggatatagcgatagtaattgttatattacattatctgctagaaaactattagagatatta
aaatctttaccatgtgataacaatgtaagtttatcattattatctgaaaatcgtttatca
atcatatctggaaaaagtaaattttctttacaaacattaccatataaagattttcctgta
attaatcaattggagcagtttgatatttttgtaaaaatatctcaaaaaaatttatttgat
ttaataaatactacatattttgctatggctcatcaagatgtacgtttctatttgaatggt
ttattattagtatttgataaaaatattattaaggctgtagctacagatggtcatcgatta
gcttttaattcaatgaaaattgattatcaaggagaatatcgtgaagtaattattcctaga
aaaaatattattgaattaatacgtttattaaataatatggatgatgatattaatatagat
gtaggttttaatcaaattaaatttagttttagtgatatagaaattatttctaaattagtt
gatggcaaatttcctgattttaataaagttatacctaatcatcataaaagagtattttca
attaagagggatgtatttcatggtagcttaatgagagtatctattatgactaatgataaa
tttaaaggtattttaataaatttaaaaaaaaatcttatgagtatttcttctaataatgca
aaccatgaagaagctttagaagaaatagatattgaatatgaatatgaaaatttaaatatt
ggatttaatgtaaattatctactggatgttattaataatattaaatctaatacattgata
ttttctataggtaacgataataattcttcagctcttattagatttcaagatcatgaaaat
tttaaatatgttgtaatgccgatgaggatttaa
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