Candidatus Kinetoplastidibacterium kentomonadis: CKSOR_00095
Help
Entry
CKSOR_00095 CDS
T05428
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kso
Candidatus Kinetoplastidibacterium kentomonadis
Pathway
kso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CKSOR_00095 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kso03400
]
CKSOR_00095 (mutM)
Enzymes [BR:
kso01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CKSOR_00095 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CKSOR_00095 (mutM)
DNA repair and recombination proteins [BR:
kso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CKSOR_00095 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
AWD32237
UniProt:
A0A3S7J989
LinkDB
All DBs
Position
complement(94025..94855)
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVENTIRGIKSIIGKRLNKLIINNYNMRWKISTKLPNILQNQIVLNCQRRGKIIL
IYFQNGIQLIHLGMSGMLYRSDISSNKKKHDHVEWLFDNEIIRLNDPRRFGYVLWHSNDS
GSIELHPRIKNLGIEPFSNKLNAEYLYKIFQKKNTEIKQAIMNSNIIVGIGNIYASEILF
NAQINPFKLVKELSLKECSRLIFNIKKILNIAINSGGSSIKNYKNMEGVNGSFIYKYAMV
YNLEGKNCKICNSLIIKKTQKQRSTYLCPSCQKFNI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagtagaaaatactattagaggaattaaatcaattattggtaaa
cgcttaaataaattaataattaataattataatatgagatggaagatttcaacaaaatta
cctaatattttacaaaatcaaatagtattaaattgtcaaagaagaggaaaaattatttta
atatattttcaaaatggaatacaacttatacacttaggtatgtcaggtatgttatataga
tctgatatttctagtaataaaaaaaaacatgatcatgtagaatggttatttgataatgag
ataattagattaaatgaccccaggagatttggttatgtattatggcattctaatgatagc
ggttcaatagaactacatcctagaattaaaaatttgggtatagaaccattctctaataaa
ttaaatgcagaatatttgtataaaatttttcaaaaaaaaaatacagaaattaaacaagcc
attatgaattctaatattattgttggaattggtaatatttatgcatcagaaattttattc
aatgctcaaattaatccatttaaattagttaaagagttaagtttaaaagaatgcagtaga
ttgatttttaatatcaaaaaaattctcaatattgcaataaattcaggtggtagttctatt
aaaaattataaaaacatggaaggtgttaatggttcttttatatataaatatgctatggta
tacaacttagaaggaaaaaattgtaaaatatgcaacagtttaattatcaaaaaaactcaa
aaacaaagatcaacatatctatgtcctagttgtcaaaaatttaatatttaa
DBGET
integrated database retrieval system
