Candidatus Kinetoplastidibacterium kentomonadis: CKSOR_00225
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Entry
CKSOR_00225 CDS
T05428
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kso
Candidatus Kinetoplastidibacterium kentomonadis
Pathway
kso03420
Nucleotide excision repair
kso03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CKSOR_00225 (uvrD)
03430 Mismatch repair
CKSOR_00225 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kso03400
]
CKSOR_00225 (uvrD)
Enzymes [BR:
kso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKSOR_00225 (uvrD)
DNA repair and recombination proteins [BR:
kso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKSOR_00225 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CKSOR_00225 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AWD32348
UniProt:
A0A3S7J9J8
LinkDB
All DBs
Position
238173..240353
Genome browser
AA seq
726 aa
AA seq
DB search
MFHNKLLNSLNNEQYKAVTIKSGHTLVLAGAGSGKTKVLTTRIFWLIDTLQAIQSDMFIV
TFTNKAAKELVMRLSKSLYISTKDTWIGTFHGLCHKMLRINYAFADLPSSFQILDVSDQL
SVIKKIYKDSNIDDKICNPKDAQRFINLQKENGIRCKDLIFINKNSYKYLCEIYSIYEQK
CKNEGLVDFSELLLKSYELLKNNQNIREFYNQKFKHILIDEFQDTNKLQYSFIKLLSGKK
SSIFAVGDDDQSIYAFRGANVGNMTDFENNFAKKQVIRLEQNYRSLGYILNAANSLIEHN
EDRLGKKLWTDQGDGEKIHVIENKNDTLEAQYISNEILHLVKNGTDMSNIAILYRSNAQS
RIFEHALFLANIPYKVYGGLRFFERQEIKHILAYLKLIANKNDNISWLRVVNFPPRGIGS
KTLEIQASIVEEKNISFYESINYIDNKYKNAIKKFSNIIDYLFEYSKKVNLVTLIEKVLE
YSGLNDYYNNTRDGNNRLENISELITAAKTFSIEENCENLPAGINYHNDNYNEINQTPLL
LFLSYASLEAGSSDNDNQKLVQMMTVHAAKGLEFDTVFITGLEEGLFPHENSINEKNGIA
EERRLMYVAITRARKKLYITYSKNRMLNGQIRHFLKSRFLSEIKNINLHFHNFNHQFNEN
CSNTKKIAPTFNNTRNLYNIGQQVKHFKFGKGIILNIIGNGKNTKIIIKFDNFGIKELLL
EFAKLE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtttcataataaattactcaattctctaaataatgaacaatacaaagcagttactatc
aaatctggacatacacttgttttggctggtgctggtagtggaaaaacaaaagtcctaact
acaaggatattttggttaatagatacattacaagctattcaatctgatatgtttatagtt
acttttacaaataaagcagctaaagaattagtaatgagattatctaaatctttatatatt
tctacaaaagatacatggataggtacatttcatggtttatgccataaaatgttaagaatt
aattatgcttttgctgatttaccatcatcatttcaaatacttgatgtatctgatcaatta
tctgttataaaaaaaatatataaagattcaaatatcgatgacaaaatttgtaatcctaaa
gatgcacagaggtttataaatttacaaaaagaaaatggtatacgttgtaaagatttaatt
tttattaataaaaatagttataaatatttatgcgaaatatattctatatatgaacaaaaa
tgtaaaaatgaaggtttagtagatttttcagaacttttattaaaatcttatgaactttta
aaaaataatcaaaatattagagaattttataatcaaaaatttaaacatattcttatagat
gaatttcaagataccaataaattacaatatagttttattaaattattatctggaaaaaaa
tcttctatatttgctgtgggtgatgatgatcaatctatttatgccttccgtggagcaaat
gtaggaaatatgacagattttgaaaataattttgcaaaaaaacaagttatacgcttagaa
caaaattatagatcattaggatacattttgaatgcagctaattctctcattgaacataat
gaggatagattaggcaaaaaattatggacagatcaaggtgatggtgaaaaaattcatgta
attgaaaataaaaatgatacattagaagctcagtatatatctaatgaaattttacattta
gttaaaaatggaacagatatgagtaatattgctatattgtataggagcaatgctcaatct
cgtatatttgaacatgctttatttttagctaatataccatataaagtatatggtggatta
agattttttgagcgtcaagaaattaaacatatacttgcttatttaaaattaatagcaaat
aaaaatgataacatatcttggttacgtgtagtaaactttccacctagaggtataggatcg
aaaactttagaaatacaagcttcaatagttgaagaaaaaaatattagtttttatgaatct
ataaattatatagataacaaatataaaaatgctataaaaaaattttctaatatcattgat
tatttatttgaatactctaaaaaagttaatttagttactttaatagaaaaagttttggaa
tatagtggattaaatgattactataataatacacgtgatggtaacaatagattagaaaat
attagcgaattaataacagctgctaaaactttttctattgaagaaaattgtgaaaatttg
cctgcaggaataaattatcataatgataattataatgaaattaatcaaacacctttgtta
ctttttctttcatatgcatctttagaggcaggaagtagtgataatgacaatcaaaaatta
gtacaaatgatgacagtacatgctgcaaaaggcttagaatttgatactgtatttattact
ggattagaggaaggattatttcctcatgagaatagcataaatgaaaaaaacggtattgca
gaagaaaggagactaatgtatgttgctattaccagagcaagaaaaaaattatacatcaca
tattctaaaaatagaatgttaaatgggcaaataaggcattttcttaaatcaagattctta
tcagaaataaagaatataaatttacattttcataattttaatcaccaatttaatgaaaat
tgttctaatactaaaaagatagcaccaacatttaataatacaagaaatttatataatatt
ggtcagcaagtaaaacatttcaaatttggaaaaggtattatattaaatataattggtaat
ggtaaaaatacaaaaataataattaaatttgataattttggaataaaagaattattatta
gaatttgcaaaattagaataa
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