Candidatus Kinetoplastidibacterium kentomonadis: CKSOR_00288
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Entry
CKSOR_00288 CDS
T05428
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kso
Candidatus Kinetoplastidibacterium kentomonadis
Pathway
kso03410
Base excision repair
kso03430
Mismatch repair
kso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CKSOR_00288 (recJ)
03430 Mismatch repair
CKSOR_00288 (recJ)
03440 Homologous recombination
CKSOR_00288 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kso03400
]
CKSOR_00288 (recJ)
DNA repair and recombination proteins [BR:
kso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CKSOR_00288 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CKSOR_00288 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CKSOR_00288 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Clathrin
Motif
Other DBs
NCBI-ProteinID:
AWD32409
UniProt:
A0A3S7J9S1
LinkDB
All DBs
Position
complement(300280..301986)
Genome browser
AA seq
568 aa
AA seq
DB search
MESRNLITIRDIPLNMYNHLLKNGIHPILAKLWSSRGVTDIKQISKKWIDMISPFKMLNI
IESANTLADSIINQKKILIIADYDCDGATACAVAIKSLKSMNANVDFLVPNRFETGYGLS
NKIVDIAYNHKNGKPDIIITVDNGISSIDGVRSANEKNISVIITDHHLPGKILPDALHII
NPNQAQCAFPSKNLAGVGVIFYLMIVLRYILRKRGIYSHKGGPQLEKLLDLVALGTIADV
VKLDDNNRLLVSKGLQQIRRGNAQKGLNALIKLLGIDYKNINVDHLGFNIAPRINAAGRL
DDISIGIECLITDDDDVANKNAILLDQINTKRRLIEKTMNQEAIEITKNYKNHKDKFSIC
IYKQEWHQGIIGLIASKLKEKFWKPVFVFAESSTLEIRGSGRSIPGINLRNILEQISLEY
RILNSFGGHAMAAGVTLNKYNFKIFSEAFEKIINNIFDSDTFKHIIETDGALDIEYMNTF
TSDLINQEVWGNGFPAPLFFDEFAVIKQEILNNSHLKMILKKNNQLLTAIFFGKCCKISN
NIKAVYKLTTQTWKQKSYFQLIIIDIIN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
gtggaatcaagaaatttaataacaattagagatattccattaaatatgtataatcattta
ttaaaaaatggtatacatcctatattagccaaattatggtcttctagaggtgtaacagat
attaaacaaatatctaaaaaatggatagatatgatatcgccatttaagatgttaaatatt
atagaatcagctaatacattagctgattctataataaatcaaaaaaaaatattaataata
gctgattatgattgtgatggcgcaacagcttgtgctgttgctataaaatctttaaaaagt
atgaatgcgaatgttgattttttagtaccaaatagatttgaaactggctatggtttatct
aataaaatagttgatatagcttataatcataaaaatggtaaaccagatataataataaca
gtagataatggtatatctagtatagatggagttagatcagcaaatgaaaaaaatatttct
gtaattattactgatcatcatttacctggaaaaatattaccagatgcattacatataata
aatcctaatcaagctcaatgtgcattcccatctaaaaatcttgctggtgtaggtgtaatt
ttttatttaatgatagtattacgttatattcttagaaaaagaggtatatatagtcataaa
ggtggacctcaattagaaaaattattagatttagttgctttaggtacaatagcagatgta
gtaaaattagatgataataatagattactagtatctaaaggattacaacaaataagaagg
ggaaatgctcaaaaaggattaaacgcattaatcaaattattaggcatagattacaaaaat
atcaatgtagatcatcttggatttaatatagctccaagaattaatgctgcaggtagatta
gatgatattagtataggaatagaatgtttaattactgatgatgatgatgtagctaataaa
aatgctatactgttagatcaaataaatactaaacgccgtttgatagaaaaaactatgaat
caagaggcaatagaaattactaaaaattataaaaatcataaagataaattttctatatgt
atatataaacaagaatggcatcaaggtataataggattaatagcatctaaattaaaagaa
aaattttggaaacctgtttttgtttttgcagaatcttcaacgttagaaattcgtggttct
ggaagatctataccaggaataaatttaagaaatattttggaacagatatctctagaatat
agaatcttgaattcatttggtggacatgcaatggctgcaggagtgactttaaataaatat
aattttaaaatttttagtgaagcttttgaaaaaattatcaataacatatttgattctgat
acttttaagcatattatagaaactgatggcgctttagatattgaatatatgaatactttt
accagtgatttaattaatcaagaagtttggggtaatggatttccagcccctttatttttt
gacgaatttgcagtaataaaacaagaaattttgaataacagtcacttaaaaatgatactt
aaaaaaaataatcaattattaacagcaatattttttggtaaatgttgtaaaatttctaat
aatattaaagcagtttataaattaacaactcaaacttggaaacaaaaaagttactttcaa
ttaataataattgatattatcaattaa
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