Candidatus Kinetoplastidibacterium kentomonadis: CKSOR_00396
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Entry
CKSOR_00396 CDS
T05428
Symbol
nusA
Name
(GenBank) Transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
kso
Candidatus Kinetoplastidibacterium kentomonadis
Brite
KEGG Orthology (KO) [BR:
kso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kso03021
]
CKSOR_00396 (nusA)
03009 Ribosome biogenesis [BR:
kso03009
]
CKSOR_00396 (nusA)
Transcription machinery [BR:
kso03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CKSOR_00396 (nusA)
Ribosome biogenesis [BR:
kso03009
]
Prokaryotic type
rRNA transcription factors
CKSOR_00396 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
RNA_pol_A_CTD
KH_1
KH_2
SAM_EPH
KH_NusA_C
AF1548-like_C
Motif
Other DBs
NCBI-ProteinID:
AWD32513
UniProt:
A0A3Q8EU94
LinkDB
All DBs
Position
complement(414361..415836)
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AA seq
491 aa
AA seq
DB search
MSREILLLVDALAREKNVTREIVFIALENALSFAMKKHFKEDIDIRISIDRNNGSYEVFR
RWLVVCDEFGLQEPDKQEILSDAIELYPDICVGEYIEEKLEPIEFGRIGAQVAKQAILQR
IREAEKEQLLNDFLDKSEGIISGTVKRFDKGDVIVETHRIEVRLPKSEIIPKENLRISDR
VKAVFLKIDNNISRGKQVIISRTSPDFIIKLFEIEVPEIEQGLLEIKGASRDPGIRAKIA
VINHDKRLDPIGTCVGIRGSRVNGVRSELGGEQIDIVLWSEDPAQFVINALAPASVDSIF
IDEENHAMDVVVDSDNLPKAIGTKGQNVKLASELTKWKINIVTKEENLDRQNNEIINIKN
IFIDDLNIEENIADILINEGFTSIEEIAYVPIQELLDIKFFDKKIVDNLRSKARNFLLTE
AIANEKRLETSNLLEIEGITVDLIKKLSEKNILTRNDLAELSTDELVNFTGLNEKEASRI
IMLARAPWFEK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcgagattcttctacttgtagatgctttagcacgtgaaaaaaatgttactcgt
gaaatagtttttattgctttagaaaatgcactatcttttgcaatgaaaaaacatttcaaa
gaagatattgatataagaatttctattgatcgtaataatggttcatatgaagtattcagg
cgttggttagtagtatgtgatgaatttggcttacaagaaccagataaacaggaaatttta
tctgatgcgattgaattatatcctgatatttgtgttggagaatatatagaggaaaaatta
gaaccaattgaatttggtcgtattggtgcacaagttgctaaacaagctattttacaacgt
attagagaagcagaaaaagaacaattattaaatgattttttagataaatcagaaggtatt
atatcaggtactgttaaaaggtttgataaaggtgatgtaatagttgaaactcatagaatt
gaagttagattaccaaaatctgaaattattcctaaagaaaatttgcgtatttctgataga
gtcaaagcagtatttttaaaaattgataataatatatcacgaggtaaacaagtaattata
tcaagaacttctcctgattttataatcaagttatttgaaatagaagttcctgaaatagaa
cagggtttattagaaatcaaaggtgcttctcgtgatccaggtataagagcaaaaatagct
gttataaatcatgataaaagattagatcctattggtacatgtgttggtataagaggctct
agagtcaatggagttagaagtgaattaggtggagagcaaatagatatagtattgtggtct
gaagatccagctcaatttgtaattaatgcattagcaccagcaagtgtagactctattttt
attgatgaagaaaatcatgcaatggatgttgtagttgattctgataatttaccaaaagct
attggtactaaagggcaaaatgttaaacttgcatctgagttaactaaatggaaaattaat
atcgttactaaagaagaaaatttagatcgacaaaataatgaaattattaatatcaaaaat
atttttatagatgatttaaatatagaggaaaatatcgctgatattttgataaatgaagga
tttactagtattgaagaaatagcttatgtgccaatacaagaattattagatattaaattt
tttgataaaaaaatagttgataatttaagatctaaagcacgtaattttctattaactgaa
gcaatagcaaatgaaaaaagattagaaactagtaatttgcttgaaatagaaggaattaca
gttgatttaattaaaaaactatcagaaaaaaatatacttactagaaatgatttagctgag
ctatctactgatgaattggtaaattttactggcttgaatgaaaaagaagcaagcagaatt
ataatgctcgctagagcaccttggtttgaaaaataa
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