Candidatus Kinetoplastidibacterium kentomonadis: CKSOR_00492
Help
Entry
CKSOR_00492 CDS
T05428
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kso
Candidatus Kinetoplastidibacterium kentomonadis
Pathway
kso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CKSOR_00492 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kso03019
]
CKSOR_00492 (pnp)
03016 Transfer RNA biogenesis [BR:
kso03016
]
CKSOR_00492 (pnp)
Enzymes [BR:
kso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CKSOR_00492 (pnp)
Messenger RNA biogenesis [BR:
kso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CKSOR_00492 (pnp)
Transfer RNA biogenesis [BR:
kso03016
]
Prokaryotic type
tRNA degradation factors
CKSOR_00492 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_NusA_2nd
KH_2
KH-I_KHDC4-BBP
PilO
S1_2
Motif
Other DBs
NCBI-ProteinID:
AWD32601
UniProt:
A0A3Q8EX47
LinkDB
All DBs
Position
complement(511886..514006)
Genome browser
AA seq
706 aa
AA seq
DB search
MFNKITKNFQYGKHEVVLETGVIARQASGSVLASIDGTVVLATVVIDKEIKENKDFFPLT
VDYIEKTYAAGRIPGGFFKREGKPSEREILISRLIDRSIRPLFPKGFYNEVQITLHTLSV
NPDINPDINALIATSAALSISGIPFEGPLGIARVGYINNNFVLNPTENQLQSSSLDLIVS
GTEDGVLMVESKACELNENIMLDAIMFGHQNMQVIIEAIHDLVSLAGQPVWNWEPNIYSD
ELVNNIKNIIGNKMSLAYEIKDKQSRVKKINEIKNYVKDSLQKQYENNLNILPNNTCIEN
IIFDIEYSLVRSKILNGEARIDGRDTRTVRPLDIQLGLLPRTHGSALFTRGETQALVITT
LGTKHDEQIIENIMGESRDKFIFHYNMPPFATGEIGRIGVPKRREIGHGYLAKKALESLL
PDPDNFQYAIRVVSEITESNGSSSMASVCGASLSLMDAGVPMKNHVAGVAMGLILEKDKF
AVLTDIIGDEDHLGDMDFKVAGTNVGITALQMDIKIQGINKDIMKVALDQAKEGRLHILN
VMNNYIQFSRSKLSNFAPKIVKINVNPEKIRDIIGKGGATIRLLTESTGAQIDISDNGTI
LISSNDESKLEDAKKRILDITTDIEIGKIYNGNIIRLLDFGAIVQIMPGKDGLLHISEIS
NNRINNINDILIINQKIQVKVIDIDDKGRIRLSSKSLDIKKDNDIK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaaattactaagaattttcagtatggaaagcatgaagttgttttagaaact
ggtgttatagcacgccaagcatcaggttctgtattagcttctatagatggtacagttgtt
ttagctactgtagtcattgataaagagattaaagaaaataaagatttttttccattaaca
gttgattatatagaaaaaacatatgctgctggacgtattccaggaggtttttttaaaaga
gaaggaaaaccttctgaaagagaaattttaatttctagacttatagatagatcaattcgt
ccgttatttcctaaaggattttataatgaagttcaaataacattacatactttatctgta
aaccctgatattaatcctgatattaatgcattaattgcaacctctgctgcattatctata
tctggtataccatttgaaggtccattaggaatagctagggttggatatattaataataat
tttgttttaaatcctacagaaaatcaacttcaatcatcatcattagatttaatagtatct
ggaacagaagatggtgttttaatggtagaatcgaaagcttgcgaattaaatgaaaatatt
atgctagatgcaataatgtttggtcatcagaatatgcaagtaattatagaagctattcat
gacctagtatcgttagcaggtcaacctgtttggaattgggaaccaaatatatattcagat
gaacttgttaataatataaaaaatattattggtaataaaatgtcattagcttatgaaata
aaagataagcaatccagagtaaaaaaaattaatgaaataaaaaattatgtaaaagattct
ttacaaaaacagtatgagaataatttaaatatacttcctaataatacttgtatagaaaat
ataatatttgatattgaatattcattggtaagaagcaaaatattaaatggagaagcaaga
attgatgggcgagatacaagaactgtaaggcctttagatattcaattaggattattacct
agaacacatggaagtgcattatttactagaggtgaaacgcaggctttagtaattactacc
ttaggtactaagcatgatgagcaaattatagaaaatataatgggtgaatctcgagataag
tttatctttcattataatatgccaccatttgctacaggagagattggtcgtataggagtt
ccaaaaaggcgagaaattggccatggttatttagcaaaaaaagctttagaatctttatta
ccagatcctgataattttcaatatgcaattagagtagtgtcagaaattactgaatcaaat
ggttcatcatctatggcttcagtttgtggtgcttcattatctttaatggatgcaggtgtt
cctatgaaaaatcatgtagctggtgttgctatgggtttaattttggaaaaagataaattt
gcagtattaacagatattataggagatgaagatcatcttggagatatggattttaaagtt
gctggtactaatgtaggtattactgcattacaaatggacattaaaatccaagggattaat
aaagatattatgaaagtagcattagatcaagctaaagaaggtagattacatattttaaat
gtaatgaataattacattcaattttctaggtctaaattatcaaattttgctccaaaaata
gtaaaaattaatgtaaatccagaaaaaattagagatattattggaaagggaggtgctaca
atacgtctattaacagaatctactggagcacaaatagatatttctgataatggtacaata
ctaatttctagtaatgatgaatctaaattagaagatgctaaaaaaaggattttagatatt
acgactgatatcgaaattggtaaaatttataatggaaatataattcgtttattagatttt
ggtgctatagtacaaataatgccaggaaaagatggtctattacatatttcagaaatatct
aataatagaataaataatataaatgatattttaataataaatcaaaaaattcaagttaaa
gtaatagatattgatgataaaggcagaataagattatcttcaaaatcattagatattaaa
aaagataatgatatcaaataa
DBGET
integrated database retrieval system
