Candidatus Kinetoplastidibacterium kentomonadis: CKSOR_00598
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Entry
CKSOR_00598 CDS
T05428
Symbol
rnr_2
Name
(GenBank) Ribonuclease R
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kso
Candidatus Kinetoplastidibacterium kentomonadis
Brite
KEGG Orthology (KO) [BR:
kso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kso03016
]
CKSOR_00598 (rnr_2)
Enzymes [BR:
kso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CKSOR_00598 (rnr_2)
Transfer RNA biogenesis [BR:
kso03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CKSOR_00598 (rnr_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AWD32698
UniProt:
A0A3S7JAJ9
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All DBs
Position
626322..628223
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AA seq
633 aa
AA seq
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MFIIFENKNNFLIGKILSETENYVNIEYAKGNRLKLKKNNILLRFNNDTKNLDHLILEAN
NLSETLDPDFIWEYVGCNEFNAIKFAKEYYGDNTNIIEILSMLIFLNKNPAYFYKIKNGD
YKPANENVLKKAIIAINKKKEILEQIERLSKLLIKGILPEEIKKSLGKIISLTDKNSIEY
KAIEKSCFILKCSPEKLLMSLGAWNDTLSMHKQIFFAKNPCYIQQKNDFSNINDNFQYPT
VIHEYIYSVDDQNTIEIDDALSVNILDNNNIKIGIHIAAPGLGVTRNSEYDRFARIRSST
IYLPGEKITMQPENVINIFSLDQNKLKPAISLYVIINTDTNQIQDTFSCIEKIIVKENLR
IHNIENIFNIESLNNEDKILPYQNWIKPLWKVSQIFAKKREIIRGKPENNSKQEYDFILE
GLPNDKYTKVHINKRSRNSPISMIISEFMILANTIWGDLLKKYSLPAIYRYVQYGKAKNS
IYPNAHDGLGVSQYLWSTSPLRRYIDLVNQWQIISAIEHGISSKLFSTFRHGDSDLFSIM
SIFESQYSEIIDFQQKIEKYWCIRWLQQNNLHYINAEIIRDKLVRFLDIPIIIKLASLPT
NLSKGEKIELEILGTDEISLDIDCRYKRSINKI
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtttattatttttgaaaataaaaataattttttaataggaaaaattctctctgaaaca
gaaaattatgtaaatatagaatatgcaaaaggtaatagattaaaattaaaaaaaaataat
attttgttaagatttaataatgatactaagaatttagatcatttgatcttagaagctaat
aatttatctgaaacattggatcctgattttatatgggaatatgtagggtgtaatgaattt
aatgctataaaatttgcaaaagaatattatggtgataatactaacataatagaaatatta
agcatgttaatatttttgaataaaaatccagcatatttttataagataaaaaatggtgat
tataaacctgcaaatgagaacgttcttaaaaaagctattatagctattaataaaaaaaaa
gaaattttagaacaaatagagagattatcaaaacttcttattaaaggtattttaccagag
gaaattaaaaaatctttaggaaaaataatttctttaacagataaaaattctatagagtat
aaagcaatagaaaaatcttgttttattttaaaatgcagtccagaaaaacttctaatgtca
ttaggtgcatggaatgatactttatcaatgcataagcaaatattttttgcaaaaaatcca
tgttatatacaacaaaaaaatgatttttctaatattaatgataattttcaatatcctact
gtaatacatgaatatatctattctgtagatgatcaaaatactatagaaatagatgatgca
ttatcagtaaatattttagataataataatataaaaattggtatacatattgcggctcct
ggattgggtgtaacacgtaatagtgaatatgacagatttgcacgaataaggagttctaca
atatatttaccaggagaaaaaattactatgcaacctgaaaatgtaataaatatattttca
ttagatcaaaataaattaaaaccagctatttctttatatgtaataatcaatactgatact
aatcaaatacaagacacattttcatgcatagaaaaaataatagttaaagaaaatttgcgc
attcataacatagaaaatatctttaatatagaatctttaaataatgaagataagatatta
ccttatcaaaattggattaaacctttatggaaagtatctcaaatatttgcaaaaaaaaga
gaaattattagaggaaaaccagaaaataattcaaaacaagaatatgattttatattagaa
ggattacctaatgataaatatactaaagtacatataaataaaagatcgcgcaattctcca
attagtatgattatttctgaatttatgatattagcaaatactatatggggtgatttatta
aaaaaatattctttgccagcaatatatagatacgtacaatatggtaaagcaaaaaatagt
atatatccaaatgcacatgatgggcttggtgtttctcaatatctatggagtacttcacca
ctaagaagatatatagatttagtaaatcaatggcaaataatatctgcaatagaacatgga
atttcttcaaaattattttcaacttttagacatggtgatagtgatttattttcaataatg
agtatttttgaatctcaatattcagagataattgattttcaacaaaaaatagaaaaatat
tggtgtataagatggttacaacaaaataatttacattatattaatgcagaaattatacgt
gataaattagtaagatttttagatattccaatcatcataaaattagctagcttgccaaca
aatttaagcaaaggagaaaaaatagaattagaaatattaggtacagatgaaatctcttta
gatatagattgtagatacaaaagatcaataaataaaatttaa
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