Candidatus Kinetoplastidibacterium kentomonadis: CKSOR_00670
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Entry
CKSOR_00670 CDS
T05428
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
kso
Candidatus Kinetoplastidibacterium kentomonadis
Pathway
kso03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kso00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CKSOR_00670 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kso03021
]
CKSOR_00670 (rpoA)
03400 DNA repair and recombination proteins [BR:
kso03400
]
CKSOR_00670 (rpoA)
Enzymes [BR:
kso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CKSOR_00670 (rpoA)
Transcription machinery [BR:
kso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CKSOR_00670 (rpoA)
DNA repair and recombination proteins [BR:
kso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CKSOR_00670 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF7645
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AWD32771
UniProt:
A0A3Q8ERR0
LinkDB
All DBs
Position
complement(703623..704621)
Genome browser
AA seq
332 aa
AA seq
DB search
MSNHGFLKPRLINIEPIGLNHARIIMEPFERGYGHTLGNVLRRILLSSMDGYAPTEIQIS
NVLHEYSTIPGIREDVVDIILNLKGIVFKIYNKNEVILQVKKNKIGPLLASDIELPHDVE
IINPNHLICNITQNNDFNMQIKVEKGKGYKPGNIRVLSEDNNISKNGIGKILLDASFSPV
RRVSYKVESARVEQRTDLDKLVMEVETNGAISPEDCIRNAARILIDQISVFASLQGTNEK
IESENHIGAPQIDPILLRPVDDLELTVRSANCLKTENIHYIGDLIQKTDNELLKTPNLGR
KSLNEIKEVLASRGLSLSTKLDNWPPKIIDDF
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcatggatttttaaagccacgtttaataaatatagaacccattggcttaaat
catgcaagaattattatggaaccttttgagcgtggttatgggcatacgttgggtaatgtt
ttacgtcgtatattattatcgtcaatggatggttatgcacctaccgaaattcaaatttca
aatgttttacatgaatattctactatcccaggaattagagaagatgttgtagatatcatt
ttaaatttaaaaggtatcgtgtttaaaatatataataaaaatgaagttatattacaagtt
aaaaaaaataaaattggtccattattagctagtgatatagaattacctcatgatgtagaa
attattaatcctaatcatttaatttgtaatataactcaaaataatgactttaatatgcaa
attaaagtagaaaagggtaaaggttataaacctggtaatatacgtgtattatctgaagat
aataatatttctaaaaatggaattggaaagatattactagatgcttcttttagtccagta
cgtcgtgttagctataaagtagaaagtgctagagttgaacaacgtactgacttagataaa
ttagtaatggaagtagaaactaatggagcaatatctcctgaagattgtatacgtaatgct
gctagaattcttatagatcaaatttctgtttttgcaagtctacaaggtactaatgaaaaa
atagaatctgaaaatcatattggagctccacaaattgatccaattttattgcgtccagtt
gatgatttagaattaacagtgagatcagctaattgtcttaaaacagagaatattcattat
attggtgacttaatacaaaaaacagataatgaattattaaaaactcctaacttaggacgt
aaatcattaaatgaaattaaagaagtattagcttctagaggtctgtcgctttctacaaaa
ttagataattggcctcctaaaattatagatgatttttaa
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