Candidatus Kuenenia stuttgartensis: KSMBR1_0339
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Entry
KSMBR1_0339 CDS
T05435
Symbol
dbpA_1
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kst
Candidatus Kuenenia stuttgartensis
Pathway
kst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KSMBR1_0339 (dbpA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kst03019
]
KSMBR1_0339 (dbpA_1)
03009 Ribosome biogenesis [BR:
kst03009
]
KSMBR1_0339 (dbpA_1)
Enzymes [BR:
kst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KSMBR1_0339 (dbpA_1)
Messenger RNA biogenesis [BR:
kst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KSMBR1_0339 (dbpA_1)
Ribosome biogenesis [BR:
kst03009
]
Prokaryotic type
rRNA helicases
KSMBR1_0339 (dbpA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Asp_Glu_race
Motif
Other DBs
NCBI-ProteinID:
SOH02855
UniProt:
Q1Q4V2
LinkDB
All DBs
Position
MBR1:complement(329646..330869)
Genome browser
AA seq
407 aa
AA seq
DB search
MKFSDLELSADILKALDKMGYNEMTPIQEATYPIIFAGHDLCALAETGSGKTAACAIPLI
QKVDPSLDAIQGLVIVPTRELCMQYVEEIRKIAAKTDVIPYAVYGGFDRAAQIARVKQTV
HILVATPGRLIDLLYEGILSFARIKCVILDEADELLKVGFLEDIEFILSCIRHKHQTLLF
SATMPDDIKKLTQDCLHEPQYISLVTKRSAPESIEHYFSYVNPKQKHEELVKYLKGEEVN
QALIFCNARHMVDSLFRLLRKDFHDIEYMHAGLAQDKRSSIIRRFRSQKIRYLIASDVAG
RGLDFSHVSHVINWDMPRDGEQYTHRTGRAGRMGRKGIAFTLVAKKDLSLLSKVISSRKI
SPCWIGKNPFNEEARSRQRIPRKKINTPSPAPLQDRKIPEKESEGQG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagcgaccttgagctttctgcagacatcctcaaagccctcgataaaatggga
tataatgaaatgactcccatccaggaggcgacttaccctataatcttcgcaggccatgat
ttatgtgccctggcagagactgggtcgggaaagacggcagcctgcgccatcccacttatt
caaaaagttgatccctccctcgacgccattcagggacttgtgattgttccgactcgtgaa
ttgtgtatgcagtatgtggaggagatcaggaaaatagcggcaaaaacggacgttatccct
tatgccgtttatggcggatttgatagggcggcacagatagccagagtaaaacagacagtg
catattttagtggcaaccccaggacggctcatagatcttttgtacgaagggatactttca
tttgcacggataaaatgtgttatccttgatgaggcggacgagctgctaaaggtaggattc
cttgaggatatcgaattcattttgtcatgtatacggcacaaacatcaaacactgcttttt
tccgcaacgatgcccgatgatataaaaaaacttacacaagactgtttgcatgaaccccag
tatatatcgcttgttacaaagagatctgcaccggaaagcattgaacattatttttcttat
gtcaacccgaaacaaaagcatgaagaactcgttaaatatctcaagggcgaggaggtgaac
caggcgcttatcttctgtaatgcacggcacatggttgactctctgtttcggctgcttagg
aaagattttcatgatattgagtatatgcacgccggactcgcacaggacaagcgttcatca
attattcgcagatttagaagccaaaaaatccgctaccttattgcgagcgacgttgcggga
agggggcttgacttttctcatgtatcgcatgtgattaattgggatatgccaagagatggt
gagcaatatacgcatcgtacaggacgtgcaggccgtatgggaaggaagggaatagccttt
accctggttgcaaaaaaggacctttcgctcctcagtaaagttatttccagcaggaaaatc
tctccctgttggataggaaaaaacccttttaatgaagaagccagatcacgccaacgaata
ccccgaaagaaaataaataccccttcacctgcgccattgcaagacaggaaaataccagaa
aaggaaagcgaagggcaaggataa
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