Candidatus Kuenenia stuttgartiensis: KSMBR1_1093
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Entry
KSMBR1_1093 CDS
T05435
Symbol
mfd
Name
(GenBank) hypothetical protein
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
kst
Candidatus Kuenenia stuttgartiensis
Pathway
kst03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KSMBR1_1093 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kst03400
]
KSMBR1_1093 (mfd)
Enzymes [BR:
kst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KSMBR1_1093 (mfd)
DNA repair and recombination proteins [BR:
kst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
KSMBR1_1093 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TRCF
UvrB_inter
Helicase_C
CarD_TRCF_RID
ResIII
SNF2-rel_dom
UB2H
DUF1474
RecG_dom3_C
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
SOH03596
UniProt:
A0A2C9CD18
LinkDB
All DBs
Position
MBR1:1179399..1182677
Genome browser
AA seq
1092 aa
AA seq
DB search
MKESIQLLRKHKQYKEIIRQLSFGKDCCVNGLWGSSANLFAAAVANEHFYTKGLTPKILL
VVPDAEDAREDWEDLKTFSNLPVTLFPAVEDIFNNESDAYEDIMAQRLFILNQLCRKNKD
ASHQTDVIVSSIQALIQPVPSKKTIGDNIVSFQKGQEYPMENLIGLLHSHHYQETSQVEN
QGEYAIRGGIIDIFPFATEIPCRIEYFGDEIESVRSFNVETQQSVAQINSCQILFVHKMY
GLHPMQGEIQKTSLLDYLSGETTIILKEPTRIESKLRQMLEITDYKEALFTEEEIFKQLK
TFTKITLSKLPFTTENNAYAFQVKAIDEFPRQIQDIVAEFKKITEAHDKTIVFCINPAEE
QRFREITSGLPEGLQRFELRRGYISQGFRFADINIAILANHEIFHRYKQHHEVKKVVQTR
AIDSFLDLKKGDYIVHVTHGIGRFLGIEIIEDDGCKREYLVLEYDEGTKIYVPATKIELV
QKYIGASGHKAKLDKIHSKSWEMRKKRAEHAVADIASDLLHIQASRNAKEGITYPPDTKW
QRDFESAFIYEETPDQLQVLETIKSDMQSKRPMDRLICGDVGYGKTELAIRAAFKAAMYG
KQAAVLVPTTILAQQHYTTFSERMADYPVEIEVLSRLKSHKEQKDILEKTLAGKIDILIG
THRLLQKDVVFKDLGLVIIDEEQRFGVAHKERFKKMRQVVDMLTLTATPIPRTLHMSLMG
IKDISSLNTPPLGRQSIRTQIMRFDPQRIRQAILLEMNRNGQVYFVHNRVYNIERIAHTL
STIVPEARILVVHGQMMDEKLLAQRMKDFVDHKADILVSTTIIESGLDIPNVNTIFINCA
DSFGLADLHQLRGRVGRYKHHAYAYIVLPIDRPVTPEAEKRVKAIEEFAELGAGFKIAMR
DLEIRGAGNILGVEQHGHIAAVGYEMYCRLLEIAVCKARNEPVSEPPDVSLKLNLESFLP
DEYIPEYSLKMDIYRRLNRSNTFKEIDEIRKEMIDRFGNAPQSVKNLLSESELRIIARDS
KIRSIVRVNNTLIIQVNDLKKAEICLSKLKKNIRVINNDTLHLRLLKDRMHPEDLVHYLK
KSLTDTDTARYS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaatctatacaactgctgcgaaagcataaacaatacaaggaaattattcgtcaa
ctttctttcgggaaggattgttgtgtcaacggcctctggggctcctctgcgaatttgttt
gccgcggcggttgccaatgaacatttttatacaaaagggttgacgccaaagatcctttta
gtcgtgccagacgctgaagatgcacgggaagattgggaagatttgaagacgttttcaaat
cttcccgtgacgctgtttccggcggttgaagatatctttaataatgaatcagatgcgtat
gaggatatcatggcgcagcggctgttcattttaaatcaattatgccggaaaaacaaagac
gcctcacaccaaacggatgtaatagtttcttcgattcaggcgcttatacagccagtccct
tcaaaaaaaaccatcggcgataatatcgtttcttttcaaaaaggccaggaatatccgatg
gagaaccttattggcctgctgcattcccatcattatcaagagaccagtcaggtggaaaat
cagggtgaatacgcaattcgtgggggtattattgatatatttcccttcgcaacggaaata
ccttgccgcattgaatattttggagatgaaattgaatctgttcgtagttttaatgtggaa
acccagcaatcggtggcacagataaacagttgccagatattattcgttcataaaatgtat
ggccttcatcccatgcagggggaaatacaaaaaacatcgcttcttgattaccttagcgga
gaaactaccattatcctgaaggaaccaacaaggattgaaagtaaattaagacagatgctg
gaaataaccgactacaaggaagcactcttcacagaggaagagatttttaagcaattaaag
acctttacgaaaattactttgtcaaaattgccgtttaccacggagaacaatgcgtatgct
tttcaggttaaggcgatagatgaattcccacgacagatacaggatattgtggcggaattt
aaaaagattaccgaagcgcatgataaaacaatcgttttttgcataaatcccgcggaagaa
caacgttttcgggaaataacaagcggcttgcccgaaggcttgcagaggtttgagcttcga
cgcggatatataagccagggattccgatttgccgatatcaatatagccatccttgcaaac
catgaaatcttccatcgttacaaacagcaccacgaggttaaaaaggtggtgcaaacccgg
gcaatcgactcgtttcttgacctgaagaaaggggactatatagtacacgtcacccacggc
atagggcgttttttgggtattgagattattgaggatgatggctgtaagagggaatatctt
gttctggaatacgatgagggaacaaaaatatatgtacctgcaacaaagatcgaacttgtt
caaaagtacattggcgcttccggccataaggcaaaattggataagattcattctaaatcg
tgggagatgcgcaaaaagcgtgcagaacatgccgttgcggacattgcaagcgatttattg
catattcaggcgtcgagaaacgcgaaggagggcattacctaccctccggatacgaaatgg
caaagggactttgaatcagcgtttatatacgaagaaacgcctgatcaattacaggttttg
gagacaataaagtctgacatgcaatcaaagagaccgatggaccgtcttatttgcggagac
gtcggttatggaaaaacagagcttgccattcgggcggcatttaaagcagcaatgtatggc
aaacaggcggcggttctggtgcccaccacaattctggcgcagcagcattacactacgttt
tctgagcgcatggcggactatccggtagaaattgaagtcttgagccggttgaaatctcat
aaggaacaaaaggatattttggagaaaacgctggcaggaaagattgatatcctcatcggc
actcaccggctgttgcaaaaggatgttgtctttaaagaccttgggcttgttattattgat
gaagaacagcggtttggcgttgcccacaaagaacggtttaagaagatgcggcaggtggtt
gatatgctgactctgacggccacgcccataccaagaacgcttcatatgtctctgatggga
attaaggacatttcttcgctaaataccccgccgctgggaaggcagtccattaggacacaa
atcatgcgatttgaccctcaacgcatcaggcaagccatattgctcgaaatgaacagaaac
gggcaggtatatttcgtccataacagggtgtataatatcgagcgcatcgcgcacacccta
tccactatagtgccggaggcgagaattttagtcgttcacggacaaatgatggatgaaaag
cttttagcacagagaatgaaagattttgtagatcataaggcggatattcttgtttctacc
acaataatagagtccgggctggatataccaaatgtgaataccatctttattaactgcgca
gactcctttggccttgccgatttgcatcaattgcgtggcagggtgggaagatacaaacat
catgcatatgcgtatattgttttacccattgatcgtccggtaacccctgaagctgaaaaa
agggtgaaggcgattgaagaatttgcggaactgggcgccggatttaaaatagctatgcgg
gatctcgaaatcagaggggcgggaaatatcctgggggtggaacagcacggccacatagcg
gcagtaggttatgagatgtattgccgtttgctggagatagccgtatgcaaggcacgtaat
gaacccgtcagcgaacctcccgatgtctcattgaaattaaatctggaatcctttctccct
gacgaatatatcccggaatatagtttgaaaatggatatttaccgaaggttgaatcgttcc
aataccttcaaagaaattgacgagatcaggaaagaaatgattgaccggtttgggaatgcg
cctcaatcagtaaaaaacctgctttccgagagtgagctaagaatcattgcaagggattcg
aaaatccgttctatagtccgggtaaacaacaccctcatcatccaggtaaatgatttaaaa
aaggcggagatttgcctttctaagttgaagaaaaatatacgggtaattaataatgacaca
ttgcatctaaggctgttaaaagataggatgcatcccgaagatttggtgcattatttaaaa
aaatctttgactgataccgatactgccaggtattcatga
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