Candidatus Kuenenia stuttgartensis: KSMBR1_1170
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Entry
KSMBR1_1170 CDS
T05435
Symbol
ligT
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
kst
Candidatus Kuenenia stuttgartensis
Brite
KEGG Orthology (KO) [BR:
kst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kst03016
]
KSMBR1_1170 (ligT)
Enzymes [BR:
kst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KSMBR1_1170 (ligT)
Transfer RNA biogenesis [BR:
kst03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KSMBR1_1170 (ligT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
DUF2322
DUF493
DUF3937
Motif
Other DBs
NCBI-ProteinID:
SOH03673
UniProt:
Q1PYI6
LinkDB
All DBs
Position
MBR1:1265523..1266086
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AA seq
187 aa
AA seq
DB search
MGVRLFIAIEITDAVREKVLHFQNDLKKASADVKWVAPENLHITLKFIGNTDEEKICGIV
DVIHQSVIEIKPFDIRYSGAGTFPAGKYPRVIFAGAVDSSGALASIYERLNRHLTALGVP
YDEHTFEAHITVGRVKTHKNIKKLMECVHSYKEFTFGQESIDHLVLMKSNLTREGPIYTR
ISNICFA
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtaaggctttttattgcgattgagattacagatgctgtccgggaaaaagtatta
cattttcaaaatgaccttaaaaaggcttctgctgatgtaaaatgggtggcgcctgaaaat
cttcatattacactaaaatttattggcaatacggatgaagagaagatttgcgggattgtt
gacgttattcatcaatctgtcattgagataaaaccatttgatattcgctatagtggcgcc
ggtacttttcccgctggtaaatatccgcgtgtaatctttgccggagctgtggattcaagc
ggcgccctggcttcaatttatgaaagattaaacaggcacttaaccgcgcttggagtacca
tacgatgaacatacatttgaggcgcatattactgtcgggcgggttaaaacacataaaaat
ataaagaaacttatggagtgtgtacattcatacaaagaatttacctttgggcaagaaagc
attgatcatctggtgttaatgaagagcaatctcactcgggaggggccgatatacacaagg
ataagtaatatttgttttgcgtaa
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