Candidatus Kuenenia stuttgartensis: KSMBR1_1721 Help Entry KSMBR1_1721       CDS       T05435                                  Name (GenBank) hypothetical protein   KO K03040   DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Organism kst  Candidatus Kuenenia stuttgartensis Pathway kst03020   RNA polymerase Brite KEGG Orthology (KO) [BR:kst00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     KSMBR1_1721  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:kst03021]     KSMBR1_1721    03400 DNA repair and recombination proteins [BR:kst03400]     KSMBR1_1721 Enzymes [BR:kst01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      KSMBR1_1721 Transcription machinery [BR:kst03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      KSMBR1_1721 DNA repair and recombination proteins [BR:kst03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       KSMBR1_1721 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_2 TPR_1 TPR_8 RNA_pol_A_CTD TPR_12 TPR_14 TPR_6 TPR_19 ANAPC3 TPR_11 TPR_7 TPR_16 TPR_17 TPR_9 TPR_CcmH_CycH ARM_TT21_N ARM_TT21_C NatA_aux_su MIT TPR_10 TPR_Slam RPN7 TPR_15 HAT_PRP39_C HEAT_Nup120 TPR-S ARM_TT21_5th PknG_TPR BTAD EST1_DNA_bind SAM_EPH TPR_NUP160_120_M TPR_EMC2 Motif Other DBs NCBI-ProteinID:  SOH04220 UniProt:  Q1Q053 LinkDB All DBs Position MBR1:complement(1874057..1875199) Genome browser AA seq 380 aa AA seqDB search MADTVSELDINKLLDAETISRETVAEIKQKVLGFLENRKIFDKKIESLREGIRKETDNAK LKDKKLLLGICLWIIGETKEAMGLLNEVKTRKIGSYYLGKCYQELGDYKNALECFERAKK SDDEEFDICMDIAETKRMAGDSNEALKVIKNFSQSHNDNAELHYQWGHCLESLGMYEEAF VHYDKALQIEPNHTKSLFQMAFNYDIAGEDDLAIEYYERCTNLRPAHKNAYMNLGILYED NGKYDDAIFCYEAVLDVEPMHERASFCLKSAKASSEMVFDEEASKKQGHEGDVLNIPISD FELSVRSRNCLEKMNIHTLRDLTRISEPDLLTFKNFGETSLNEIKAILIQKGLQLGQSYD GHNIEKSTGKKTGSLKRAKG NT seq 1143 nt NT seq  +upstreamnt  +downstreamnt atggcagatacggtatctgagttagatatcaacaaactccttgacgctgaaacaatttca agagagactgttgctgagataaaacaaaaagttttaggctttttagaaaacaggaagatc tttgataaaaaaatagagtcattaagggaaggaataaggaaggaaactgataacgctaaa ctgaaagacaaaaagctgttgctgggaatatgtttgtggatcattggagaaacgaaagaa gctatgggcttattgaatgaagtaaagacaaggaaaataggctcgtattacctggggaaa tgttatcaggaattgggtgattataaaaatgcgttagagtgttttgaacgggcgaaaaaa tcagatgatgaagaatttgatatctgcatggatattgccgagacaaaaagaatggcgggc gacagcaatgaggcattaaaggtaataaagaatttttcacagtcacacaacgacaacgct gaactgcattatcaatggggacattgcctggagtccttggggatgtacgaagaggctttc gtgcattacgacaaggcgcttcagatcgaaccaaatcatacgaaatctctttttcaaatg gcatttaattacgatatcgccggggaagacgaccttgcgattgaatattatgaacgatgc accaacctccgtcctgcccataaaaatgcatacatgaatttagggatattatacgaagac aatggaaaatatgatgacgcaattttttgttatgaagccgttttggatgtagagcctatg cacgaaagggcctcattttgcctgaagagtgcaaaggcttcttcggaaatggtttttgat gaggaggcgtcgaaaaaacagggacatgaaggtgacgtgttaaatattcccatttccgac ttcgaactttccgttcggagcagaaattgccttgaaaaaatgaatattcataccttaaga gatctgacaagaatttcagaaccagatttgttgacatttaaaaattttggggaaacctct cttaacgaaataaaggcaatattgatacaaaaaggattacaattgggacaatcctatgat gggcacaatatcgagaaatccactggcaaaaagactggttccctgaagagggcaaaaggt tga

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